Pseudopodoces humilis (Tibetan ground-tit): 102100366
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Entry
102100366 CDS
T02921
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04137
Mitophagy - animal
phi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102100366 (OPTN)
04137 Mitophagy - animal
102100366 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102100366 (OPTN)
Membrane trafficking [BR:
phi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102100366 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102100366 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102100366 (OPTN)
Xenophagy
Cargo receptors
102100366 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
102100366
NCBI-ProteinID:
XP_014110700
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MSSKLKGRPAENGEHSKSKIENGMDSMAAPALSTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKDRYEELSTWREKQKEEREFYELKFKEAKQCLQAKCIENEQLQQQLQSLKEREEG
TEMEGCTAPEKEVRQLKSQVQRLQAEKVDLLAIISELQVKLNISAEDSFVEIGMIEGEIN
RTAKEHQENSGEMPSNVAVYMSKSADESKNLESEELTVSQLLCCLRNETQKREELEKELQ
DHKERLSELEKDTRNCLESGTQTEQEEESSEAVGSEVETLNLQVCALFKELQEAHEKLKE
AELIQKKLQEKCQILERKSLAAASELEEKQQLIYTIKKLELQVESMQAEVKLEQAKTHEE
KARYNNLQDSYSKLLPELTEAMKKIDEMKLKELDRVDKAVVEQLTAKVELAEQALAAKQL
QIDEMKQIIAKQEEDLETMSVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLKE
QQNLEDLGRTSLAEMQSRHGARMPDREHSPHLVQRGTNSQDWPEQRNISIYSCPKCEEIL
PDLDTLQIHVMDCIN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagttgaagggccgtcctgctgaaaatggagagcattccaagagtaaaata
gaaaatggaatggacagcatggctgccccagcacttagcacctacaccccggaagagatg
gtgcagcagatgaaagaactaatcactgagaacaatgagttaaaagaagccatgaagttg
cacaaccaagctatgaaggaccgttatgaggagctttccacctggagagagaagcagaaa
gaagaacgagaattttatgagttaaagtttaaggaggcaaagcagtgcttgcaggccaag
tgcattgaaaatgaacagctacagcagcaacttcagagcttaaaggaaagagaagaagga
actgaaatggagggctgcacggctcccgagaaggaagtgaggcagctgaagtcccaggtg
cagcggctccaggctgagaaggtagatctgcttgccatcatttcagagctccaggtcaag
ctgaacatctcagcagaggattcctttgtggagattgggatgattgaaggagaaataaat
agaactgcaaaggaacatcaagagaatagtggtgaaatgcccagtaatgttgctgtctac
atgagcaaatctgcagatgaatctaagaatttggagtctgaggagctaactgtgagccag
ctgctctgctgccttagaaatgaaactcagaagagggaagaacttgagaaggagctgcag
gatcacaaagaaagactgtcagagctggagaaggacaccagaaactgcctggagagtgga
acacaaactgaacaggaagaagagagttcagaagctgttggcagtgaagtagaaaccctg
aatctgcaagtttgtgctctgtttaaagagcttcaggaagcccatgaaaagttaaaagaa
gcagaattgattcagaagaaacttcaagaaaaatgccagatactggaaagaaaaagcttg
gctgctgcatcggaattggaggagaagcagcagctaatatacaccatcaagaagctggaa
cttcaggtggaaagcatgcaggcagaggtcaagctggaacaagccaaaacacatgaagaa
aaggcaagatacaataaccttcaggattcatatagcaaactccttccagaactcactgag
gccatgaaaaaaattgatgaaatgaaactcaaagagctggacagagtagataaagctgtg
gtggaacaactgacagcgaaggtggagttggcagaacaagcccttgctgcaaagcaactc
cagatagatgaaatgaagcagataattgctaagcaagaggaggaccttgaaactatgtct
gtgctccgtgctcagatggaggtttattgttctgatttccatgctgagagggcagcaaga
gagaagatccatgaggagaaggagcagttggctgtccagctggcatacctactaaaagag
caacaaaaccttgaagatcttggccgaacctctctggcagagatgcagagtcgccacgga
gccaggatgccagatcgggagcactcacctcatcttgtccaaagaggaactaatagtcaa
gattggccagagcagcggaatatttcaatttattcatgtcctaaatgtgaagaaattcta
cctgatttggacacactgcagattcacgttatggactgcattaattga
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