Pseudopodoces humilis (Tibetan ground-tit): 102100372
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Entry
102100372 CDS
T02921
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phi03037
]
102100372 (NPHP4)
Cilium and associated proteins [BR:
phi03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102100372 (NPHP4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
102100372
NCBI-ProteinID:
XP_014112667
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Position
Unknown
AA seq
1368 aa
AA seq
DB search
MGDWDQVFRQYLPLPPHPQRGRARPPPRSTAFRCVLKYLHGAALSQGAEYQLRLSLFDAT
YHHFFGRTWRSSWRVASAAPPRSARATFCEVIYFHTSLNHPGIAAVVEVVMMAGKGDGSS
QHLSCGFGIIPLFHSGSEVTDPATEDRALKLYHGTPRALLHPRFQNPVEKNKYMTVMEKS
YLQYALKSHQPLEAIFHLLPENLLISGLQTVPGLLPARGDTGDCLQKPRLMKTVTCYLER
LFIQLYPSLEEFEEELLDLLNSDRLLQANTGPDGEELVVRERRLHVGVHNGLRFVQAPQV
AVLVPGAELSPSGCQRVPSSGARDAGQALVLRSRIQLSEMVPHPAFGVCFQLEYVFCSTG
RAGGKALSGSARSEAADMRSVRWAVWSPVLGTGDTDVVLPLRGGARRGPCQALVYRTPLS
SRQGKHVESGTVQFCVSTDSEEHLVSAAELLCKDRDESKQPPTPSLRVPTPRRVPVSPRG
PGLSVSQLVASPQGTGQTLQQDGGITHLETDLGSPDTEPCASDQLRALPFTPLQLPMAAV
GLQACSFHVSLSRAALARLHAAGFPDILDRNQEPVEISEPVELGSFNLQLEEADPLQGNE
IVLQFLAFDRDAQGSVEGLWPRTVFLTFQFYRFPPVTTPRLQLVSTDGGLATGLAVPAQL
LFRVNEDGTLTKPPGLQLKYMVDPAFLRPGEQRWFLRYLAEHSLQIDVWDGDSLLHVGSA
AIKLEPLLRQGQTAVRTYHELEVATTEYEPDGTVMGREALRHGALRPLGVRVAVRGRLHL
CLANVGHPCEGTPGQLPFHSRIVTAPDSTVTTPGGGWNSLNTPGGRRTARARRLVDVDNE
LEAALRSRRPEGWPKQRAWDLQVIDAYRDHIKGESIYQMLSQAITATHTVHAVLGTAEFF
EFALKNPYSVQHTVTIEVNDPELSVILDPREWRHFKELTKSVTPVEEDMFHLRDDLKPQV
YLRPSETVHIPFKYQTFSADPAVVAARGPAGLGTGANGSTHSLGKSGAKQTKLIQVREPG
ETLLEGLCGRSRITGKPHSSPAGPXGQVTFQVSGGKPIALLRVKVEPQPHVVDQTFRFYH
PELTFLKKTIRLPPWYTLPGTPVGVPGGQPEMFVRCSDPDIICETKSLGPGEPQDIFLKV
AGGPSPQIKKFFVAIYMDTWLAAPVQIWQFYLHSLQRLDVACTAGQLTRLSLLLRGTAAP
RRVQAFTSHPQEMEMDPSGAFLLPANGIQDLYIGVRPRRAGSKFIYLNLVDVESHQLVSS
WLLCLSCRQPLISKAFEISLPVGGGKGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKEDS
FEVAGGEVYTIGLRFAPSQTVGEEEILIHINDHEDKNEETFCVKVLYQ
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactgggaccaggtgttccggcagtacctgccgctgccgccgcaccctcagcgg
ggccgggcccggcccccgccccgctccaccgccttccgctgcgtcctcaagtacctgcac
ggcgctgccctctcccagggagccgagtaccagctgcgcctctctcttttcgatgccacc
taccaccacttctttgggaggacgtggaggagcagctggcgagttgccagtgctgccccg
ccacgctcggccagggcgacgttctgtgaggtaatttatttccacacctccttgaaccat
cctggcattgctgctgttgtggaagtggtaatgatggctgggaaaggggatgggagctct
cagcatctttcctgtggctttggaatcattcctctcttccacagcggatcagaggtgaca
gacccagccactgaggacagagcgctgaagctgtaccatgggactccacgtgccctattg
cacccgcgcttccagaaccctgtggaaaagaacaaatacatgacagtgatggagaagagc
tacctgcagtatgccttgaagtcccaccagcccctggaggcgatatttcacctccttcct
gaaaacctgctgatatctgggctacagactgttcctggcttgctgccggcacgtggagac
acaggcgactgcttgcagaagccccgactgatgaagaccgtcacctgctatctggagcgg
cttttcatccagttgtacccttccctggaggagtttgaggaggaactgctggatttactg
aacagcgatcgcttacttcaggctaacactgggccggacggtgaagagctggtggttcgg
gagcggcggctgcacgttggcgtccacaatggcctgcgcttcgtccaggcaccgcaggtc
gctgtgctggtgccaggggcagaactgtcaccgagtggctgccagagggtgcccagctct
ggagccagggatgcaggtcaagccctggtgctgaggagccgcatccagctgagtgaaatg
gtccctcacccggcattcggggtctgcttccagctggaatatgtcttctgcagcacgggg
agagctggtgggaaggccctgtccggcagtgcccgcagcgaggcggccgacatgcgctcg
gtgcgctgggctgtctggagccccgtcctgggcaccggtgacacggacgttgtcctgccc
ctgcgtggcggtgcccgccgtggcccctgccaagccttggtctaccggaccccactgagc
tcccggcaggggaagcacgtggagtctgggactgtccaattctgtgtttccactgattcg
gaagaacatcttgtatctgctgcggagctcctatgtaaagacagggacgagtcgaagcag
cctcctacgccatcgctgagagtgccaaccccacggcgagtgccagtctccccacgggga
ccagggctgtcggtgtcccagcttgtggcctcaccacagggcacaggccagaccctgcag
caggatgggggcatcacccacctggagaccgacctgggctcaccggacacagagccctgt
gccagcgaccagctgcgggcactgcccttcacccctctgcagctgcccatggctgctgtg
gggctgcaggcatgcagtttccatgtgtccctctctcgtgctgcactggcacgcctgcac
gctgccggctttccagacatcctggaccgcaaccaggagccagtggaaatctcggagcca
gtggagctgggcagtttcaacctgcagctggaggaagctgaccctctgcaaggcaatgaa
attgtcctgcagttcctggcttttgacagggatgcccagggcagtgtggaggggctgtgg
ccaaggacggtcttcctcaccttccagttctaccgtttcccaccggtcaccacaccccgg
ctgcagctggtcagcacagatgggggtctggcaactgggctggctgtgccagcacagctc
cttttccgtgtcaacgaggatgggaccctaaccaaaccaccaggcttgcagctgaagtac
atggtggatccggctttcctgcggcctggggagcagcgctggttcctgcggtacctggcc
gagcacagcctccagattgacgtctgggatggagactccctgctccatgttgggtctgct
gccattaaactggagcccctgctgcgccagggccagacggctgtcaggacctaccacgag
ttggaggtggccacgactgagtacgagccggacgggacggtgatgggccgggaggctctg
cggcacggcgccctgcggcccctcggtgtccgtgtggctgtgaggggccgcctccacctc
tgcctggccaatgttggtcacccgtgcgaggggaccccaggacagctgccattccactcc
cgcattgtcactgcaccagacagcactgtcaccaccccaggtggtggctggaactccctg
aacactcctggtggcaggaggacagcgcgggcccgcaggctggtggatgtggacaatgag
ctggaggccgcactgcgcagtcgccggccagaaggctggccaaaacagcgtgcctgggac
ctgcaggtcattgatgcctaccgggatcacatcaagggagagagcatctaccagatgctc
agccaggccatcacagccacccacactgtccatgctgtgctggggacagctgagttcttc
gagttcgccctgaagaacccgtacagtgtccagcacactgtgaccatcgaggtcaatgac
cctgagctcagtgtcatactggacccgagggagtggcgccacttcaaggagctgaccaag
agtgttacaccagtggaggaggatatgttccatctccgtgatgacctgaagcctcaggtc
tacctgcgccccagtgagactgtccacatccccttcaaataccagacgttctctgcagac
cctgctgtggttgcagcacgggggccggctgggctgggcaccggtgccaatgggagcact
cactcccttgggaagagcggggccaaacagacaaagctcatccaggttagggaaccaggt
gaaacgctgcttgaggggctgtgcgggaggagcagaatcactggaaaaccccattcctct
cctgctggccccntgggacaggtcaccttccaggtgagcggggggaagcccattgcactc
ttgcgggtgaaggtggagccgcagccccatgtggtggaccagacctttcgcttctaccac
ccagagctcaccttcctgaagaaaaccattcgtctgcctccctggtacaccctccctggc
acaccagtgggggtgccaggcgggcagcctgagatgtttgttcgatgcagtgaccccgac
atcatttgtgaaaccaaatccttggggcctggtgagccacaggacatcttcctcaaagta
gctggaggaccaagcccgcagatcaaaaagttctttgttgctatttatatggacacctgg
ctggcagcacctgtccagatctggcagttctacctgcactcgctgcagcgcctggacgtg
gcctgcacagccgggcagctcacccgcctctccctgctgctgcgtggcaccgcggccccg
cggagggtgcaggccttcacctcccacccccaggagatggagatggatccaagcggtgcc
ttcctcctccccgccaatggcattcaggacctgtatatcggcgtgaggccacggcgggct
ggcagcaagttcatctacctcaacttggtggatgtggagtcccaccagctggtgtcctcc
tggctgctctgcctgtcctgcaggcagcccctcatctccaaggcctttgagatctcgctg
cctgtgggaggtgggaaaggctgcaacaagcgcatcacctacaccaacccctacccctcg
cctcggctctacttcttatgcaccaaccgccccgacctgctgcagttcaaggaggattcc
ttcgaggtggctggaggggaggtgtacaccatcggcctgcgcttcgccccgagccagaca
gtgggggaggaggagatcctgattcacatcaatgaccacgaggacaagaacgaggagacc
ttctgcgtgaaggtcctgtaccagtga
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