Pseudopodoces humilis (Tibetan ground-tit): 102100382
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Entry
102100382 CDS
T02921
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102100382 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102100382 (POLB)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102100382 (POLB)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102100382 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102100382 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH_3
HHH_2
NTP_transf_2
IMS_HHH_1
Cdd1
DUF6932
Motif
Other DBs
NCBI-GeneID:
102100382
NCBI-ProteinID:
XP_005530839
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISRYPSKIQSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINLLTRVTGIGPAAARKFVEEGIK
TLEDLRKIEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEIKKLDANYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESSKQSKLLHQVVEQLEKVHFVTDMLSKGDTKFMGVCQ
LPDKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRR
LGVTGVAGEALPVECEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaagctccccaggagagccccaacgagggcatcaccgatttcctcacc
gagctggccaactacgagcgcaacgtgaaccgggccatccacaagtacaacgcgtacagg
aaagcggcctcggtcatttctcggtatccgagcaagatacagagcggggcggaagccaaa
aagctggatggagtaggtgctaaaatagctgaaaagatagatgagttcttgtccactgga
aaactacgcaagttggaaaagattcgacaagatgatacaagtgcttccatcaatctcctg
acacgagtcactggcattggtcctgctgctgctaggaagtttgtcgaggaaggaattaag
actttagaagatctaagaaaaattgaacacaagctgacccatcaccagcgaattgggctg
aaatacttcgaagattttgagaaaagaatcccaagggaagaaatgctgcaaatgcaggaa
attgtgctgaaagagataaagaagctggatgcaaactatattgctacagtctgtggcagt
tttaggcgaggtgcagagtcaagtggcgatatggatgttctcctaacccatcccagtttc
acatctgaatcatccaaacagtcaaaacttttgcatcaggttgtagaacaactggaaaaa
gtccactttgtcacagatatgctgtctaaaggtgacacaaaattcatgggtgtctgtcag
ctgccagataaagaagatggaactgcctatccacatcggagaattgatatccggctaatc
ccgaaagatcagtattactgtggtgtactgtatttcacaggaagtgatatatttaataag
aacatgagaactcatgctctggaaatgggcttcacaatcaatgaatatacaatacgtcgc
ttgggtgttactggagttgctggagaggccctgccggtagagtgtgaaaaagacatcttt
gactatatccagtggaaataccgagagccaaaggatcggagtgaataa
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integrated database retrieval system
