Pseudopodoces humilis (Tibetan ground-tit): 102100392
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Entry
102100392 CDS
T02921
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102100392 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102100392 (CHD8)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102100392 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
HTH_Hrp3
HDA2-3
Chromo_MIT1
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
102100392
NCBI-ProteinID:
XP_014117894
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MADPMLELFDDPHLFGLEPLPPEEELGPGDSKRITLVLQQPAGAAAAAPGQRHVLQVQPP
AAPGQPGQPQKIQLIQQAGAGPLGVAQVPQVLGGAGQRLTVPLKVVLQPQAGSSAGGSSA
GLSVVKVLSGAEVTSPAPASRGASDESRKLEHQKKQEKANRIVAEAIARARARGEQNIPR
VLNEDELPSVRPDDDGERKRRRKGPGERGGAKEERPRRGKGQGGGKSKGRGKASTITPVV
GKKRKRNASSDNSDSELLPAPSPRRDDDAGVQKRRSNRQVKRKKYTEDLDIKITDDEEDE
ELDVTGPARPEQPPAPPPPEPDGDALPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QLVESEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKRFKTKMNQMRHFFHEDEEPFN
PDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELQEDVDEAKIAEFKRIQA
RHPELKRQPRPQAGAWKKLEASHEYKNHNRLREYQLEGVNWLLFNWYNSVPQGRLIPGAY
KFDALITTFEMILSDCPELREVQWRCVVIDEAHRLKNRHCKLLDSLKHMDLVQKLQALLK
PMMLRRLKEDVEKNLAPKQETIIEVELTNAQKRLYRAILERNFAYLARGAGHGNVPNLLN
TMMELRKCCNHPYLINGAEEQIVAELRASLPAPAPPDLALQALVRSAGKLVLLDKLLPRL
RAGGHKVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER
EMFDKASLKLGLDKAVLQSMSGREGSIAGIQQFSKKEIEDLLRKGAYAAIMDEDDEGAKF
CEEDIEQILLRRSTTITIESEGKGSTFSKASFVASENRTDIALDDPNFWQKWAKKADLDL
ELLNSKNTLVIDTPRVRKQTRHFSTLRDDDLLDFSELDSDDEPDRPRPRRGHHAGHHAGH
HAGHHAGHHGSGHHGSGHHGQHAAAPQPFGRSECVRVEKHLMVFGWGRWRELTAQPRCPR
RLSEREAERLSRAIVLLCLRHFRGDAGTRAFACGLLAGERGCGAAPRGRKGKKAQKVPEG
PEWLRRHEPEGLLPDESFRKHLRHHSARILLRVRTLHFLRHEVIGDEAEKVLAGASASDV
HIWFPLLEQLEVPSAWWDPEADKSLLLGVFKHGYGRYHSMRADPALCFLAKAGGPDAAAL
AAEQRLEGPEGADFDRDPEDPEYKPLQGGGEESDPLAALDEEISVVDGDEGNGGGWTRRE
QADFLRVASTFGVELEPGSGRFRWGRFRALANLERRSDEDLTRFYHGFVAMCRQVCRLPP
APGDVPPALSPPPVPVSPALALRCLRRLALLRCLRERVLPHPALPALLARLPGPGSLLPP
WWLPGAHDAQLLRAAARHGLRGALLRAALRHRRGDGDGTGNGDNTGDNTGNSTGNNTGNN
TGNNTGNNTGNTGDNTGNGDTTGDNTGSHRDYRRTAEMEEEEQQRDVGGPEPLEAEDEEE
EEEEEEEDEEGEDDEDSPPPSGEGGSPKPPLPHPEEGLKLTFQKHRLGPNGAARGPPPKK
NSKKLVELELRCLEGLRDPRGDPEGVVAAPPPPRGDGPEFAEPRLLPVSPEIPGIGPKPA
GPAPNPPGFTPNPLFAPPPTVRGAAAGKVAPEKGLDLSKMVALMGGGASGAGGVASPSLA
PPPHFRPEAEEEAEAGSGCCPLLADPMLPPTSDSD
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccatgctggagctctttgacgacccccacctgttcgggctggagcccctc
ccccccgaggaggagctgggccccggcgactccaagcgcatcacgctggtgctgcagcag
ccggcgggcgcggcggcggcggcgccgggccagcgccacgtgctgcaggtgcagccgccg
gccgcgcccggccagcccggccagccccagaagatccagctgatccagcaggcgggggcg
gggccgctgggcgtggcccaggtgccgcaggtgctgggcggggccggccagaggctgacg
gtgccgctcaaggtggtgctgcagccgcaggccggctcctccgcgggcggctcctcggcc
gggctctcggtggtcaaggtgctgagcggcgccgaggtgacgtcgccggcgccggcgtcg
cgcggcgcgtcggacgagagccgcaagctggagcaccagaagaagcaggagaaggccaac
cgcatcgtggccgaggccatcgcccgcgcccgcgcccgcggcgagcagaacatcccgcgg
gtgctcaacgaggacgagctgcccagcgtccggcccgacgacgacggcgagcgcaagcgg
cgccggaagggccccggcgagcgcggcggcgccaaggaggagcggccgcggcgcgggaag
ggccagggcggcggcaagagcaaggggaggggcaaggccagcaccatcacgccggtggtg
ggcaagaagcgcaagcgcaacgcgtcctccgacaactccgactccgagctcctcccggcg
ccgtccccgcgccgcgacgacgacgccggcgtccagaagcggcgctcgaaccggcaggtg
aagcgcaagaagtacacggaggacctggacatcaagatcacggacgacgaggaggacgag
gagctggacgtgacggggccggcgcggccggagcagccgccggcgccgccgccccccgag
cccgacggcgacgcgctgccctccatgcagttcttcgtggagaacccgagcgaggaggac
gcggccatcgtggacaaggtcctgtccatgcgcgtggtcaagaaggagctgccgtcggga
cagttggtggagtccgaggagttcttcgtcaagtacaagaactactcgtacctgcactgc
gagtgggcgacgatcgcgcagctggagaaggacaagaggatccaccagaaactcaaacgc
ttcaagaccaaaatgaaccaaatgcggcatttcttccacgaggatgaggaacccttcaac
cccgactacgtggaggtggatcggatcctggacgagtcgcacagcgtggacaaggacaac
ggcgagccggtggtgtattacctggtcaagtggtgctcgctgccgtacgaggacagcacc
tgggagctgcaggaggacgtggacgaggccaaaatcgccgagttcaaacggatccaggcg
cggcaccccgagctcaagagacagccacgcccgcaggccggggcctggaagaagctggag
gcgtcgcacgagtacaagaaccacaatcggctgcgggaatatcagctggagggggtgaac
tggctgctgttcaactggtacaacagtgtaccccagggccggctgatcccaggtgcgtac
aagttcgacgcgctgatcaccaccttcgagatgatcctgtccgactgtcccgagctgcgc
gaggtgcagtggcgctgcgtggtcatcgacgaggcgcaccgcctgaagaaccggcactgc
aagctgctggacagcctcaaacacatggacctggtgcagaagctgcaggcgctgctgaag
ccgatgatgctgcggcggctgaaggaggacgtggagaagaacctggcccccaagcaggag
accatcatcgaggtggagctgaccaacgcgcagaagcggctgtaccgcgccatcctggag
cgcaacttcgcttacctggcccggggggcggggcacggcaacgtccccaacctgctcaac
accatgatggagctgcgcaagtgctgcaaccacccctacctcatcaacggcgcggaggag
cagatcgtggcggagctgcgggcgtcgctgccggcgccggcgccgccggacctggcgctg
caggcgctggtgcgctcggccgggaagctggtgctgctggacaagctgctgccgcggctg
cgcgccggcgggcacaaggtgctggtcttctcgcagatggtgcgctgcctggacatcctg
gaggactacctcatccagaaacggtacccgtacgagcgcattgacgggcgcgtccggggg
aacctgcgtcaggcggccatcgaccgcttcagccggccggactcggatcgcttcgtgttc
ctgctgtgcacccgcgccgggggcctgggcatcaacctgacggccgcggatacctgtatc
atcttcgactcggactggaacccccagaacgacctgcaggcgcaggcgcggtgtcaccgc
atcgggcagagcaaggcggtgaaggtgtaccgcctgatcacccgcaactcgtacgagcgc
gagatgttcgacaaggccagcctgaaactggggctggacaaagccgtgctgcagtccatg
agcggccgcgagggcagcatcgccgggatccagcagttctccaagaaggagatcgaggac
ctgctgcgcaagggcgcctacgccgccatcatggacgaggacgacgagggcgccaagttc
tgcgaggaggacatcgagcagatcctgctgcggaggagcaccaccatcaccatcgagagc
gagggcaagggctccaccttctccaaggccagcttcgtggcgtccgagaaccgcacggac
atcgcgctggacgaccccaacttctggcagaagtgggccaagaaagccgacctggacctg
gagctgctcaacagcaagaacacgctggtcatcgacacccctcgggtgcggaagcagact
cgccacttcagcacgctgcgggacgatgacctgctggacttctcggagctggacagcgac
gacgagcccgaccggccgcgcccgcgccgcggccaccacgccggacaccacgccggacac
cacgccggacaccacgccggacaccacggctccggccaccacggctccggccaccacggc
cagcacgcggccgcgccgcagccgttcgggaggagcgagtgcgtccgggtggagaaacac
ctgatggtgttcgggtggggtcgctggcgggagctgaccgcccagccgcgctgcccacgc
cgcctgtcggagcgcgaggccgagcgcttgagccgcgccatcgtcctgctgtgcctgcgc
cacttccggggggacgcggggacgcgcgccttcgcctgcgggctgctggccggagagcgc
ggctgtggggcggcgccgcggggccggaaggggaagaaggcccagaaggttccggaaggt
ccggagtggctgcggcgccacgagcccgaggggctcctgccggacgagagcttccggaaa
catctgcggcaccacagcgccaggatcctgctgcgggtgaggacgctgcacttcctgcgc
cacgaggtgatcggggacgaggccgagaaggttctggccggggccagcgccagtgacgtg
cacatctggttcccgctgctggagcagctggaggtgccctcggcctggtgggaccccgag
gccgacaaatccctgctgctcggggtcttcaagcacgggtacggcaggtaccacagcatg
cgcgcagaccccgctctctgtttcctggccaaggccgggggtcccgacgccgcggctctg
gcggccgagcagcgcctggaggggcccgagggggcggattttgacagagaccccgaggac
cctgagtacaaacccctgcaggggggcggagaggagagtgaccccctggccgcgctggac
gaggagatctcggtggtggacggcgacgaaggtaacggcgggggctggacccggcgggaa
caggccgatttcctgcgcgtggcctccaccttcggggtggagctggagccgggctcgggc
cggttccgctggggaaggttccgggccttggccaacctggagcggcgctcggacgaggac
ctgacgcgcttctaccacggcttcgtggccatgtgccggcaggtgtgccgcctgccgccg
gctcctggcgacgtgccgcccgcgctgtcccctcctcccgtcccggtgtcgccggcgctg
gcgctgcgctgcctgcggcgcctggcgctgctgcgctgtctgcgcgagcgggtgttgccg
cacccggcgctgccggcgctgctggcgcggctgccgggccccggctcgctgctgccgccc
tggtggctgccgggggcgcacgacgcccagctgctgcgggcggccgctcgccacggcctg
cggggggcgctgctgcgcgccgccctccggcaccgccgcggggacggggacggcaccggg
aacggggacaacaccggggacaacaccgggaacagcaccgggaataacaccgggaataac
accgggaataacaccgggaataacaccgggaataccggggacaacaccgggaacggggac
accaccggggacaacaccggcagccaccgggactacaggcggacagcggagatggaggag
gaggagcaacaacgggacgtggggggcccggagccgctggaggccgaggatgaggaggag
gaagaggaggaggaggaggaggatgaagagggggaggacgatgaggattcccctcccccc
tcgggcgagggcggctcccccaaaccgcccctcccccaccccgaggaggggctcaaattg
accttccagaaacatcgcctgggccccaacggggccgcgcgggggccgccccccaaaaag
aacagcaagaagctggtggagctggagctgcgctgcctcgaggggctccgggacccccgg
ggggaccccgagggcgtggtggccgcccctcccccgccccgcggcgacggccccgagttc
gccgagccccggctgctcccggtgagccccgaaatccccggaattggccccaaacccgcg
gggcccgccccaaacccgccgggattcaccccaaatcctctcttcgcccccccccccaca
gttcgtggagcagcggcgggaaaagtggcaccggaaaaaggtttggacctttccaagatg
gtggcgctgatggggggcggggccagcggcgcggggggagtggcctcgccttccttggcc
cctcccccgcacttccggcccgaagcggaagaggaagcggaagcgggaagtgggtgctgc
cccctgctggccgaccccatgctgccgcccacttccgactcggattaa
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integrated database retrieval system
