Pseudopodoces humilis (Tibetan ground-tit): 102100617
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Entry
102100617 CDS
T02921
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102100617 (TNC)
04518 Integrin signaling
102100617 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102100617 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102100617 (TNC)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102100617 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Fn3_PBP1
Fn3_Dep-1_3rd
Pur_ac_phosph_N
DUF7949
EGF
Interfer-bind
NDNF
EGF_PEAR1L
EGF_TGFA-like
hEGF
SPE9_EGF_3rd
Big_5
Motif
Other DBs
NCBI-GeneID:
102100617
NCBI-ProteinID:
XP_005527250
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MGLPSWVLACAILALLSQHVTGGLIKRIIRQKREAGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPIKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCICEP
GWKGPNCSQASCPSDCNDQGKCVDGLCVCFEGYTGPDCSQELCGQGCGPHGRCVGGQCVC
HEGFVGDDCSVPLCPHNCHGRGRCVDSECVCDEGYTGEDCSELICPNDCFDRGRCVNGTC
FCEEGFTGEDCGELTCPNDCHGNGRCENGLCVCHEGFVGDDCSDRRCPNDCHHRGRCVGG
QCVCHEGFLGEDCGELRCPNDCHNRGRCENGQCVCHEGFIGEDCGELQCPNDCHNRGRCE
NGQCVCHEGFTGEDCAELRCPNDCHNHGLCVNGQCVCHEGYTGEDCGELRCPHDCHHRGR
CVEGHCECDNGFTGDHCGELACPNNCHGRGRCVDGRCVCHEGFVGEDCRERSCPNDCNNA
GRCVDGRCVCEDGYIGDDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLITYVPTSS
GGLDMQFTVPGNHTAATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLRFK
SVWETSVQVEWDPLNFSFDGWELVFHDMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNV
SIHIVKNNTRGPGLSKVITTKLDAPSQVEAKDITDTTALVTWSKPLAEVEGVELTYGPKD
IPGDRTTIDLSEDENQYFIGNLRPHTEYEVTLVSRRGDMESDPVKEVFVTDLDAPRNLKR
VSQTDNSITLEWKNSHANVDNYRIKFAPISGGDHVEIAVPKGSQATTRATLTGLRPGTEY
GIGVTAVRNDRESAPATINAGTDLDNPKDLEVSEPTETTLSLHWRRPVAKFDRYRLVYSG
ASGKKSEVEIPVDSTSFLLQGLDPGTEYTISLLAEKGRHKSKPTTVKGFTEEEPELGAFS
VAETGWDGFQLTWTAAEGAYESFVIQVQESGQPEERRNVTVPGGLSSANVTGLKANTPYT
ITLQGVARGYRTKPLSLETTTGEQPGVAELMVSDITPESFNLSWTASNGDFDVFTIEIID
SNRLLEPMEFNLSGDSRTAHISGLSPSTDFIVYLSGISRGFHTQAISAAATTEAEPEVDN
LLVSDATPDGFRLSWTADDGVFNSFVLKIRDTKRKSDPLELIVPGHERTQDITGLKEGTE
YEIELYGISSGQRSQPVNTVASTVVGSPKGISFSDITENAATVSWIPPRSRVENFRISYI
PVTGGTPNVVTVEGSKTRTKLVKLVPGVDYNVSIISVKGFEESEPVSGTLKTALDSPSGL
VVVNITDSEALATWQPAIAAVDNYVVSYSSEEEPEVTQMVSGNTVEYDLKGLQPATEYTL
SIHAQKDAQRSESLSTHFTTGLDAPRDLSAAEVQSEAAVINWRPPRAPVTGYLLIYESID
GSVKEVILDRGTSSYSLAELSPSTQYTVKLQALSGALRSKMIQTIFTTTGLLYPYPKDCS
QALLNGEATSGLYTIYLNGDKAQPLQVFCDMGEDGGGWIVFLRRQNGKQDFYKNWNTYVA
GFGDPKDEFWIGLENLHKITSQGQYELRVDLRDKGDAAYAVYDRFSVGDAKSRYRLRVDG
YSGTAGDSMTYHNGRSFSTFDKDHDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQ
GVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccagctgggtcttggcctgtgccatcctcgctttgctgtcccagcacgtc
actgggggactcatcaagagaattatccggcagaagagggaggctgggctgaacgtgacc
ttgccagaggataaccagcctgtggtgttcaaccatgtctacaacattaagctgcccgtt
ggctccctctgctccgtggacctggacacggccagtggcgacgccgacctgaaggcggaa
attgagcccatcaagaattacgaggagcacacggtgaatgaggggaaccagattgtcttc
actcacaggattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtctcctccttgcgggagcagtgt
gccagcggggctggatgctgtcctaattcccaggcagtagaaggtcgcctggacaccaca
ccctattgcagcgggcatggcaactacagcatcgagatctgcggctgcatctgtgagccc
ggctggaagggccccaactgcagccaagcctcgtgtccctccgactgcaacgaccagggc
aagtgcgtggacgggctgtgcgtgtgcttcgagggctacacaggcccggactgcagccag
gagctctgcggccagggctgcggcccccacgggcgctgcgtgggcgggcagtgcgtgtgc
cacgagggctttgtgggtgacgactgcagcgtgcccctgtgtccccacaactgccacggc
cgcgggcgctgcgtggacagcgagtgcgtgtgcgatgagggctacaccggcgaggactgc
agcgagctcatctgccccaacgactgcttcgaccgcgggcgctgcgtgaacggcacgtgc
ttctgcgaggaggggttcaccggggaggactgcggggagctcacctgccccaacgactgc
catggcaacgggcgctgtgagaatgggctgtgcgtgtgccacgagggctttgtgggcgac
gactgcagcgacaggaggtgccccaacgactgccaccaccgcgggcgctgcgtgggcggg
cagtgcgtgtgccacgaggggttcctgggcgaggactgcggggagctgcggtgtcccaat
gactgccacaaccgcgggcgctgcgagaacgggcagtgcgtgtgccacgagggcttcatc
ggggaggactgcggagagctgcagtgtcccaatgactgccacaaccgtgggcggtgcgag
aacgggcagtgcgtgtgccacgagggcttcacgggcgaggactgtgccgagctgcggtgt
cccaatgactgccacaaccacgggctgtgcgtcaacgggcagtgcgtgtgccacgagggc
tacacgggcgaggactgtggggagctgcgctgcccccacgactgccaccaccgcgggcgc
tgcgtggaggggcactgcgagtgtgacaacggcttcaccggggaccactgcggcgagctg
gcctgccccaacaactgccacgggcgtgggcgctgcgtcgacgggcgctgtgtgtgccac
gagggattcgtgggtgaggactgccgggaacgctcctgccccaatgactgcaacaatgcg
gggcgctgcgtggacgggcgctgtgtctgcgaggatggctacatcggggatgactgctcc
gatgtgtctcctccaactgagctgactgtgaccaacgtgacggataaaactgtcaatctg
gagtggaagcatgagaacctcgtcaacgagtacctcatcacctacgtccccaccagcagt
gggggcttggacatgcagttcactgtgccaggaaaccacacagctgccaccatccatgag
ctggagccaggcgtggagtactttatccgtgtctttgcaatccttaaaaacaagaagagc
atcccagtcagcgccagggtagccacatatctgcctgctccagaaggtctgagattcaaa
tctgtttgggaaacatccgtccaggtggagtgggaccctctgaacttttcttttgatggc
tgggagctcgtcttccatgatatgaaaaaggatgataatggggacataaccagcagcttg
aaaaggccagagacatcctacatgcagccaggtttggcacctgggcaacagtacaatgtg
tccatccatatagtgaagaacaacaccagaggaccaggactgtccaaagtcatcaccaca
aagcttgatgcccccagccaggtggaggccaaagacatcaccgacaccacggctctcgtc
acctggtccaaacccttggctgaagttgaaggtgtagagctcacttatggccccaaggac
attccaggggacaggacaaccattgacctctctgaagatgagaaccaatatttcattggc
aacctgaggccacacacagagtatgaagtgacgctcgtctctcgtcgaggggacatggaa
agcgaccctgtgaaggaagtttttgtcacagacctggatgctcccaggaacctgaagagg
gtgtcccagactgacaacagcatcaccctggagtggaagaacagccacgccaatgtcgac
aattacagaattaagtttgcccccatctctggtggggaccacgtggagattgcggtgccc
aagggcagccaggccacaaccagagctacactcacaggtttgaggcctggaactgaatat
ggcattggagtgacagcagtgaggaacgacagggaaagtgctcctgccaccatcaacgct
ggcactgatcttgataaccccaaggacttggaagtcagtgagcccactgagaccaccttg
tcccttcactggagaaggccggtggccaagttcgaccgctaccgcctcgtttacagcgga
gcctcggggaagaagagcgaggtggagatccctgtggacagcacctccttcctgctgcag
gggctggatccaggcaccgagtacaccatcagcctgctggcagagaagggcaggcacaaa
agcaaacccaccactgtcaagggtttcacggaggaggaacccgagctgggagcattttca
gtagcagagactggctgggatggtttccagctcacctggacagcagctgagggtgcctat
gagagctttgtcattcaggtgcaggagtctgggcagcccgaagagaggaggaatgtcaca
gtgccggggggcctgagctctgccaatgtcaccggcctcaaggccaacactccttacacc
atcacccttcagggggtcgctcggggctacaggaccaagcccctttctcttgagaccacc
acaggagagcagcccggcgttgctgagctaatggtctccgacattacccccgaaagcttc
aacctctcctggacagcctccaacggggactttgacgtctttaccattgaaattattgat
tctaacaggttgctggagcccatggagttcaacctctcaggcgactcaaggactgctcat
atctcagggctttctcccagcactgatttcattgtctacctctccgggatctctcgcggg
ttccacacacaggcaatcagtgctgcagctaccacagaagcagaacccgaggtggacaac
cttctggtttcagacgcgactccagatggattccgtctctcctggactgcggatgacggg
gttttcaacagttttgttctaaaaatcagggacaccaaaaggaaatctgaccccctggag
ctgatagtgccaggccacgagcgcacccaggatatcacagggctgaaagagggcactgaa
tatgagattgagctctatggaattagcagtggacaacgttcccagcctgtaaacacagta
gcatccacagtggttggctctcccaagggaatttctttctctgacatcacggaaaatgct
gccacagtcagctggatcccccctcgctcccgcgtggaaaacttccgcatctcctacatc
cccgtcacgggaggtactccaaatgttgtcacagtcgaagggagcaagacaaggaccaag
ctggtgaagttggtcccaggtgtggactacaatgtcagcatcatctctgtgaaaggcttt
gaagaaagcgagcccgtctctggcaccctgaaaacagctctggacagcccatcaggcctg
gtagtggtgaacatcacagactctgaggctctggcaacctggcagccagcaattgctgct
gtggataactacgtggtgtcctactcctctgaggaagagccagaagtgactcagatggtc
tcggggaacacggtggagtacgacctgaagggtctccagcctgccaccgagtacacgctg
agcatccacgcgcagaaggacgcgcagaggagcgagagcctctccacccacttcaccaca
gggctggatgctccaagggatttgagtgctgctgaggtgcagtcagaagctgctgtgata
aactggaggcctccccgtgctccagtcactggctatctcctcatctatgaatccatcgat
ggcagcgtcaaggaagtcatcctagaccgtgggacaagttcctacagcctggcagagctg
agcccctccacgcagtacacggtgaaactgcaggccctgagtggggccctgaggagcaaa
atgatccagaccatcttcaccaccactgggctcctctatccctaccccaaggactgctcc
caggccctgctgaatggagaagccacctctgggctctacacaatttacctgaacggggac
aaggctcagcctctgcaagtgttctgtgacatgggcgaggatgggggcggatggatcgtg
ttcctgaggcgtcagaatggaaagcaagatttctacaagaactggaatacttacgtggca
gggtttggagatcctaaggatgaattctggataggtctggagaacctgcacaaaatcact
tctcagggccagtacgagctgcgggtggacctgagggacaagggggacgcggcctacgcg
gtgtacgaccgcttcagcgtgggcgatgccaagagccgctaccgcctgcgggtggacggc
tacagtggcacggcaggtgactccatgacctaccacaacgggaggtccttctccaccttt
gacaaggaccatgattctgccatcaccaactgtgctctgtcatacaaaggagctttctgg
tacaagaactgtcaccgagtcaacctgatgggcagatatggtgacaacagccacagtcag
ggcgtcaactggttccactggaagggccatgagtattccatccagtttgcagagatgaag
ctgagaccctccagcttccggaacctggaggggcggcggaagcgagcgtag
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integrated database retrieval system
