Pseudopodoces humilis (Tibetan ground-tit): 102100762
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Entry
102100762 CDS
T02921
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X2
KO
K12190
ESCRT-II complex subunit VPS36
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102100762 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102100762 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phi04147
]
102100762 (VPS36)
Membrane trafficking [BR:
phi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102100762 (VPS36)
Exosome [BR:
phi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102100762 (VPS36)
Exosomal proteins of colorectal cancer cells
102100762 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
BBL5
DUF5847
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
102100762
NCBI-ProteinID:
XP_005516393
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggacaaccgggctgctggagctgggagagacgctagtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacatagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctctctcagattgtatttattgaagagcaagcagctgggataggaaagagtgcc
aaaattgtagttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcctacatcaaactttctttcaaagaacatgggcagattgagttctacaga
cgattatcagaagaaatcacacaaagaagatgggagagcatgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggctgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctat
ttattgagtatgggtatagctaatccagtaacgagggaaacgtatggatctggtacacag
taccacatgcaactggcaaagcaactggctggaatcctgcagacacccttagaggagaga
ggggggatcatgtctcttacggaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctggaatcactgaaattgcca
ctaaggcttcggatatttgatagtggcgtaatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctccttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacaaagctaa
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