Pseudopodoces humilis (Tibetan ground-tit): 102100928
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Entry
102100928 CDS
T02921
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X4
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102100928 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102100928 (PATL1)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102100928 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102100928 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102100928
NCBI-ProteinID:
XP_005529012
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MFRYPSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEDKA
GSSREPDGPVGNDGDVLGDPEDALAERLTRLVIDSELEDPAIMQAVHTRDPPQPGGLNSS
IWDSSAVLRRIRGPLLAQEMPPVSVLDYALPQRPLQARDEERDPSERALPRRSSSPIIGS
PPVRAVPIGTPPKQAAIPNFNQQILCPKPVHIRATMQQRYPTPYGERMSPNQLCNVPNSS
LLGHPFPHSVPPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRVG
QMMSPAGGFRAFFGAPPAPPPSQLPHPPGPGSHLQNLRPQTQMFRPDTTHLHPQHRRLLH
QRQQQNRNQHRSLNGSGGDRGGHRSSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTD
PYLDDYYYQNYFQKLEKLAAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGKL
TVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYLL
SLEGERPALMGERKQKICDMYDNLRGKAPGQDRPSDDHFMQIMCIRKGKRLVARILPFLA
PEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQS
AAAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTNTELMQDNQWTELMLMATRELLR
IPQGALAKPMSIPSNLISLFSRYVDQQKLNLLETKLHLVQGIR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtacccgtccctggaggactgcccgctggacgaggatgaagatgccttccag
gccctgggggaggaggatgaagacatcgaccagttcaacgatgacacctttggggctggg
gccgtcgatgatgactggcaggaggcccacgagcggctggcggagctggaggacaaggcc
gggtcgagccgggagccagacggtcccgttgggaatgacggggatgttctgggtgacccc
gaggacgcgctggccgagcggctcacgcgacttgtcatcgacagcgagctggaggacccg
gccatcatgcaggccgtgcacaccagggaccccccacagcctggagggctgaattccagc
atctgggacagttcagctgtgctgcggcgcatccgggggccgctcctcgctcaggagatg
ccgcccgtgtccgtgctggattatgcccttccccagaggcctctgcaggctcgggatgaa
gagcgggatccatcggagcgggcgctgccccggcgctcctcgtcccccatcatcggcagc
cccccggtccgggctgttcccatcggcacccccccgaaacaggccgccatcccaaacttc
aaccagcagatcctgtgtcccaagcctgtccacatccgagctaccatgcagcagcgttat
cccactccctatggagagaggatgtcccccaaccagctctgcaatgttccgaattcctcc
ctcctgggccacccgttcccccacagtgttcctcccgttctcacgcacctgcagagagcc
cagctgcttggaggagcccaggccggccgaatgtcccccagccagtttgcccgggtgtcc
gggctggtggggagcccgctgccctccgtgaatcccaagctgctccagggcagagttggg
cagatgatgtccccagccggtgggttccgtgcctttttcggggctccccctgccccgccc
ccctcgcagcttccgcaccctccaggccccggatcccacctgcagaacctgaggccgcag
acccagatgttccggccggacacgacccatttgcacccccagcaccgccggctcctgcat
cagcggcagcagcagaaccgaaaccagcaccggagcctcaacggctccgggggggaccga
gggggccaccggagcagccatcaggagcagatccgtaaggatccctatgccaacctcatg
ctgcagcgggaaaaggactgggtgtccaagatccagatgatgcagctgcagagcactgat
ccctacctggatgattattattatcagaattacttccagaagctggagaagttggcagca
gctgaggaagtgcacggtgatggtcccaagaaggagcgcactaaactcatcaccccacag
gtggccaagctggagcacacctacaagccagtgcagtttgagggctcgctaggaaagctc
accgtctccagtgtcaacaacccccggaagatgatcgacgccgtggtgacgtcccgcagc
gaggatgatgagacaaaggagaagcaggtccgggataagaggcgacagacccttgtcacc
atcgagaagacgtacagcctcctcctggacgtggaggactatgagcgccgctacctcctg
agcctggaaggggagcggccagccctgatgggagaaaggaagcagaagatctgtgacatg
tatgacaatctgagggggaaggcacctgggcaggacaggccgagtgatgaccacttcatg
cagatcatgtgcatccggaaaggaaagcgcctggtggcccggatcctccccttcctggct
ccagagcaagcggccgacgtgctcatggccacggccaggaacctgcccttcctcatcaag
aaggatgctcaggatgaggtgcttccctgcctcttgaggcccttttcccatgtcctctac
caccttcccttgggaacagtcaccagccttgtgcagcagctcacgaacctacctcagagc
gccgccgctcccaccaacctgcacctcactgctgtgctccaaaacaagtttggtctgtcc
ctgctgtacctggttctgagccgaggggaggaattgcagagctcagacacaaacacggag
ctgatgcaggacaaccaatggacagagctgatgctgatggcgacccgggagctcctgcgg
atccctcagggagctttggcaaagcccatgtccatcccctccaacttgatctccctcttc
tctcgctatgttgaccagcagaagttgaacctgctggagacaaaattgcacttagtgcag
gggatccggtag
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integrated database retrieval system
