Pseudopodoces humilis (Tibetan ground-tit): 102101020
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Entry
102101020 CDS
T02921
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102101020 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102101020 (XRCC5)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102101020 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
102101020
NCBI-ProteinID:
XP_005520033
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MASSGKVAIVLCLDVGLTMSSSSPGEESSLEQAKKIMTKFVQRQVFAESKDEVAVVLFGT
NGTRNDLSSEDQYQNITVHRSLMLPDFDLLEDIQDVIKAGSKQADFLDAIIVCMDLLQKQ
TIGKKYEKRHIELFTDLSSPVSEDQLGIIIANLKKTGISLQFFLPFPVSVDGGSGDTSAS
VHAHIHRNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMER
RPMPWLCQLTIGPNLSIRIVAYKSVTEERVKKLWTIVDAKSLRKEDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGNQAL
KVFAAKGDENAAVAFSALVRALDELKVVAIVRYAYDRRCNPQIGVAFPCIKDAYECLIYV
QLPYMEDLRQYVFSSLKNSKKCIPTADQLSAVDSLIDSMNLVHEDGETSEDLFKPSKIPN
PHFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEMPCVVRERCQTPLQRVKALFPLKEIGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEESFSIMKLAEGSITSVGSVNPAEDFRILVRK
KNADFKDVSQQLINRIDQFLENKGSQYYMKGIDCIRVFREEAMKLSKVQCFNDFLQALKS
KLEDKALSDFWEIMVQDRISLITKDEVEQSSVTGEEAAKFLAPKEQKNESLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcggcaaggtggcaatagtgctgtgcctggatgtaggtcttacaatgagc
agctcttcccctggtgaagagtcttcacttgagcaagccaagaagattatgacaaagttt
gtgcagcgacaggtttttgctgagagtaaagatgaagttgctgtagttttgtttggcact
aatggcactagaaatgacctttccagtgaggatcaataccaaaatattactgtacatagg
tcactaatgctgccagattttgatctgctggaagacatacaagatgtgattaaagcaggc
tctaaacaagcagactttttggatgctattattgtgtgtatggacttgcttcagaagcaa
acaataggaaagaaatatgagaagagacacattgaactgtttacagatcttagtagtcct
gttagtgaggatcagctgggaattatcattgctaacttgaagaaaacaggaatttcactt
cagttttttctgccgtttccagtgagtgttgatggtggaagtggagatacaagtgccagt
gtacatgctcatatacacagaaactcttttccaataaagggtttaactgaacaacaaaag
cagggtattgatgtggtgaggaaactcatgtatactttggatgaagaaggagggctggaa
gaaatttatactttcagagagagcctggaacgtctttcaatgtttaagaaaatggaaaga
aggcctatgccttggctctgccagctcactattggtcccaatttgtctataaggattgtg
gcctacaaatcagtcacagaagagagggtgaaaaaactttggacaattgtggatgctaaa
tccctcagaaaagaggatgtgcaaaaggaaactgtttactgcttgaatgatgatgatgag
acagaggttcagaaagatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtt
ttgggattcactagatcctctcagatccagaggcattactacatgggcaaccaggctctg
aaggtctttgcagcaaaaggcgatgagaatgcagcagttgctttttctgcacttgttcgt
gcattggacgagttgaaagtggtggctatagtgcgctatgcttatgatagaagatgcaac
ccacaaattggagtagcttttccgtgtattaaggatgcatatgagtgtctcatctatgtg
cagctaccctatatggaagacctaagacaatatgtgttttcatccttgaaaaacagtaaa
aaatgcattcctacagcggatcagttatctgctgttgactcactgattgattctatgaat
ttggttcacgaagatggagaaacttctgaggacctatttaagcccagcaaaattccaaac
cctcattttcagaggttatatcagtgtttgcagcacaaggcttttcaccctgataagcca
ctgccgccaatagaacagcacctcttagaaatgctggagatgccttgtgtggtaagagaa
cgatgtcagactcctctgcaaagagtaaaagcacttttccccctaaaggaaattggcaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaatgaagacgaacccagcctt
aagaaaccaaaaattgaagatgaggaagagagctttagcattatgaaacttgctgaaggc
agtatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcagttcttg
gaaaataaaggttcacagtactacatgaaagggattgactgtatcagagtttttagagag
gaggccatgaagctgtccaaggtgcagtgctttaatgactttctgcaggccctgaaatca
aagttggaagataaagccttatctgatttctgggagatcatggtacaagatagaatttct
ttgatcaccaaagatgaagtggagcaaagttcagtgacgggtgaagaggctgcaaagttc
ttggctccaaaagaacagaaaaatgaaagcctgcctcctacagatgaaggtggtgatgtt
gatgatctgctggacatgatgtga
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