Pseudopodoces humilis (Tibetan ground-tit): 102101239
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Entry
102101239 CDS
T02921
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X3
KO
K12879
THO complex subunit 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102101239 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
102101239 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102101239 (THOC2)
03041 Spliceosome [BR:
phi03041
]
102101239 (THOC2)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102101239 (THOC2)
Spliceosome [BR:
phi03041
]
Complex C
Other components
EJC/TREX
102101239 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102101239 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
102101239
NCBI-ProteinID:
XP_005530063
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD
QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK
ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS
GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL
CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIV
EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI
MDQMPPFYSTSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPVSSLPNKRAPKQAESF
EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL
SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ
TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL
TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAIFRKYPIELAGLLQYV
ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK
SSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL
ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH
KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN
KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL
LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI
IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK
ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL
ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG
PGGAGMPTSLAINTVRLEEGTTEETADKLKEKSQGVVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKMVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENA
KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHY
INHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKDKGDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctcccagccgagtggataaagaactgggagaaaggcggcaagaatgag
tttgtgcagttgtgtcgtgctctcagtgaaaacaaaaaccatgatgtgggtttcagagat
attcagcaggctttgtatgagcttgcttatcacgttgttagaggaaacttaaagcatgat
caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatccta
gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg
gatcattttacacaactggtattggcctgtttgtatcttgtatctgacactgtcctaaag
gagcgtttagatccagagacgctggagtcattgggactcatcaagcagtctcaacagttc
aatcaaaaatctgttaaaataaagacaaaactattttacaagcaacagaagtttaatttg
ctaagagaggagaatgaaggttatgcaaagctcattgcagagctgggtcaagacttatcc
ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat
cttgatcctaacagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat
gatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaactcta
tgccatatccttgggttcaaattcaagttttatcaggatccaagtggtgagaccccttcc
tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt
tatgttcatcttctaccaggggataatgccatcattgaggaacacaagcgagagatagtg
gaagctaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag
gaaaaggagaaagaaaaggaaaaagaggaggagaaaactgaaaagcctcctgataatcaa
aaacttggcttattggaagccttattaaaaattggtgattggcaccatgcacaaagtatt
atggatcagatgcctccattttactctacttcacacaagccgattgcaattgcactttgc
cagcttgtccatgtgacaattgagcctctgtaccgcagagttggtgtacctaaaggagct
aaagggtcacctgtttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt
gaggaattgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccat
gatcccattttatttgcaaaagtagtgcgccttggaaaagcatttatgaaagagtttcag
tctgatggaagcaaacaggaagataaagagaaaatggagacactgttcagctgtttgttg
agtattactgatcaagtcttgcttccatctctttccttgatggactgcaatgcatgcatg
tctgaggaattatggggaatgttcaaaacctttccataccagtaccggtaccgtctctat
gggcaatggaagaatgaaacgtataacagtcacccacttcttgtgaaagttaaagctcaa
accatagaccgagccaaatacattatgaagcgcttaactaaggaaaatgtgaaaccctct
ggaagacaaattgggaagctcagccacagcaatcctacaattttatttgactatatttta
tcgcaaatacaaaaatatgataacttgataactccggttgttgattcgctgaaatacctc
acttccctgaactatgatgtcttggcatattgtatcattgaggcactggcaaaccctgag
aaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagtctggcaagt
ttttgtggtgccattttccgaaaatacccaattgaacttgcaggcctcctgcagtatgtg
gccaaccagctgaaagctggcaaaagctttgatttgcttattttaaaagaggtagtgcag
aaaatggcagggatagaaattactgaagaaatgacgatggaacaattggaagccatgact
ggtggagaacaactgaaagctgagggtggatactttggtcaaatcaggaatacaaagaag
tcatcgcagagattaaaagatgctttattggaccatgatcttgccctcccactgtgcctg
cttatggctcaacagagaaatggtgttgtctttcaagaaggaggggaaaaacatttgaag
ctggtgggaaaactgtatgatcagtgccatgacaccttggtacaatttggtgggttttta
gcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgt
aatgagtttcacacacctcacgatgctgcatttttcctctcaagacccatgtatgcacac
cacatttcatcaaagtatgatgaactaaagaaagctgagaagggaaataaacagcagcac
aaagttcacaaatacattacatcatgtgagctggtgatggctcctgttcacgaagctgtg
atttctctgcacctccctaaagtatgggatgacatcagccctcagttctatgctacattc
tggtctttaacaatgtatgaccttgccgtgccacacagcagctatgacagagaagtcaat
aaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaag
aaaaaagaaaaagaacgttgcacagctttgcaggacaagctccttgaagaggagaagaag
cagttggagcatgtgcagagggttctgcagagactgaaactagagaaagataactggctt
ctggcaaaatctaccaaaaacgagactatcaccaaatttttacagttgtgtatatttcct
cgatgcattttttcggcaattgatgcagtttactgtgctcactttgttgaactggtgcat
cagcagaaaacacccaatttctccacacttctctgctatgaccgagttttctctgatatt
atatatacagttgcaagttgcacagaaaatgaagccagtagatatggcaggtttttatgc
tgtatgctggagaccgtgaccagatggcacagtgacagagtcatatatgaaaaggaatgt
ggcaactatccaggcttcctaactatattacgagcaactggatttgatggtggaaataag
gctgatcagttggattatgagaattttagacacgtggtacacaagtggcactataaatta
actaaggcttctgtgcactgtctggaaacaggtgaatatacacatatcagaaacatcctg
attgtgctgaccaaaatccttccatggtatccaaaagtgctgaatctgggtcaagccttg
gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca
ttggctatgggctattctggacaattgaaaagtaggaagcctttcatgatacctgaaaat
gagtttcaccacaaagacccacctgccaggaatgctgtacctgcaacagtacaaaatggg
ccaggtggtgctgggatgcctacgtctcttgcaataaatacagttagactggaagagggc
actactgaggagactgcagataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaaactgtcaacgctacaccgaaggtgacaacaagcaacggaaacagtgcatctaat
agcaaaattattaaagagaaagatgataaagaaaaaagtgggaaggaaaaagataaagaa
aaaaaagacaagactccagctgccactccggagatgaaggcacttgggaaagatgggaaa
gataaaccgaaggaagaacgggcaaacaaagacgagaaagcaagagagatcaaggagaaa
acgccaaaatctgacaaagaaaaggaaaaagtgaagaaagaagaaaaagcttcaaaagaa
gaaaagtccaagatggttgttaccatcattgagtcaaagtcaactgcagaaaaggagaga
gaaaaggagccatccagagaaagagatctagcaaaggaaatgaaatccaaggaaaatgct
aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttcccagatcagaa
acatcagaatctgaaagggaacaaaaacgacgcaaagttgatacacattcttctccatca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac
ataaaccacactactccaacactgtccaagagtaaggagagagaagtggagaagaaagat
ttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacagtgaccgagaggtaccgcaggattcaactaaaaga
cgcaaagaggaaaatggcacaactggttcttcaaaacacagcaaaagtgaaagtccttct
gattcccctcgattaaatgaaaaagagaaggagaaaaacaaatcaaaatcttcaggaaaa
gacaaaggtgactcaatcaaggcagaaaagatggagaagagctcctctggtagcaaaaag
gaatcaagacatgataaagaaaaaacagagaagaaagaaaaacgagacagtactgggggg
aaagaagaaaagaaacatcataaatcttcagacaagcatagataa
DBGET
integrated database retrieval system
