Pseudopodoces humilis (Tibetan ground-tit): 102101345
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Entry
102101345 CDS
T02921
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102101345 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102101345 (EDC4)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102101345 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
102101345 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WDR55
Motif
Other DBs
NCBI-GeneID:
102101345
NCBI-ProteinID:
XP_014111012
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MASCSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPLGSGDGPAL
AKPVHRNISLGALQEKQVICLSGDDSSTCLVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDSTPLNTFRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPDIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDSLSVEGAQGSGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTSASMPSHSSH
EEFAFPDHMADLSTEGLGSEKESVHGSQPDLRRITDLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRASEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPGEVLEPGHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
AQRLPVKDWKVKASPRASPKLKRKGKKDDGDMNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLDRVLMEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPTISQLSNTIAAKLTAVEG
TLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLEAHLKNKKVREQEVRDPLLNQLRQLISTFQSTTEQLASTIAASVHAE
VQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHM
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEDAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHN
PLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgctccagcatcgacatcgaggacgccacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcggtgaatgagaaccagagaccatcgaattcgtataac
ggggacctgaatgggctgctggtgcctgatccccttgggagcggagatggacctgctttg
gccaagccagtgcatcggaacatctctctaggagccctgcaggagaagcaagtcatctgt
ctttctggtgatgacagctcaacatgtttagtgatatctgcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaaatactattacggcaatctgatagctgtttca
aactcttacctggcttatgccattagagctgccagcaatggctctgctatggtgcgggtg
ttgagtgtcagcactgctgagcggaccttgctgaagggattcacaggaggcgtggcagac
ctggcctttgctcacctcaactccaaccagctggcctgcctggacgaggctggcaacctt
tttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcttggtcaacatc
aagcgacctgacagtaccccactgaacaccttccggagaatcatctggtgccctttcatc
ccggatgataacgaggagagcggggaagaggggagtcagaccttggcgttgttgcatgag
gacagggcagaggtgtgggatttggacatcatccgaaccaacaacagctcctggccggtg
gaagtgcctgatatcaaagaaggtttcattgtggtgaaaggccacagcacgtgcctgagc
gagggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgta
aaattctggcagatctatattgagggacaggatgagccaaggtgtcttcatgagtggaaa
ccccatgatggtagacctctttcctgcttgcttttttgtgacaaccataaaaaacaagac
ccagaagttcccttctggaggtttctcatcacaggagccgatcagaacagagaactgaag
atgtggtgcaccgtgtcttggacttgtttgcagactgttcgcttttctcctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctctgctgaatatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gagggcaaggcttacttcagctccatctctgagttcctccttacccacccagtgctgagc
tttggcatccaggccgtgagccgctgccggctaaggcacaccgaggtgctcccagcagaa
gaggaaaatgacagcttgagtgtagaaggtgctcagggctctggggctgtcgaatcagca
gcaggtgtgctgataaaactcttctgtgttcacaccaaggccctacaggatgtgcagatt
aggttccagcctcttcatagccctgacacaagtgcttccatgccttcccatagctctcat
gaagaatttgcctttccagaccacatggctgatctgagcacggaagggctgggatctgaa
aaggaatctgtgcacggctcccaaccagacctgcggcgtatcactgatctgcctgtgcca
gcagacttcctttccctctccaatgatgccaagcccaagctgatgactccagatgcattc
atgacaccaagtacttctcttcagcagattgctgtctctccaggcagcagcgtcagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacggatgcctctttgcccagagca
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctcagcagc
agcagcagcagtctccagaccagtcctaggagtcactctgttcttatcccaggcctccct
gacaagctaacaccaaaggcacctgttccagtcgcaccaggaaactcctctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgctcc
ccagatgtcatttcctctgcttccacagccatgtcccaggatatcccagagattgcttcc
gagaccctgcagcgcagctttgcggcggctccgtccgggctccctggggaggtgctggag
cccgggcaccatgcagacagtatggcctcagctgcctcagccctgcacttgctgtctccc
aggaaccgccacaactctgagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccatcattactggagactgctttaactcaggaaaatgcatcttct
gacagtgttgtgagtcagccatggccagcagctcctgacataacccgggagaccaggaac
agcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctaccat
agacacagctaccacctcctgcagcatgacagccaggatgccagtgcagaacaaagtgac
catgatgatgaagttgcaagcttggcttctacgtcaggtggatttggtgccaaagcatct
gcgcagaggctgcctgtgaaggactggaaagtcaaggcatccccacgggcttccccaaag
ctaaagcggaagggcaagaaagatgatggggatatgaaccagtcaccaagatcatctaac
aaccaggtgacaccagagttccaggatgagctgatgtgcatcctgaggagccaacagcgg
gaactctccgagctgcggcagaaccagatggagctcctgcagaggctcacagatcacctc
gatgccatccagagctccctcatgggccacatggagagggtgattgactcccagcaggag
caggagcagagaagactggaccgggtgctgatggaagggcagcagcgcaatgggcagctc
caggagcacctgtcccagcagctgtcccagtccctgtccacagctgtgtgtaaccgtctg
gagaggaccattcgggaggagatgaagaagacagtgccgcagtgcatttccaagagcatg
gaccctaccatcagccagctcagtaatactattgctgccaagctcactgctgttgagggg
acactgaaagagaatattaccaagctagtgaaatcaaagaatcttacagacagtgttgtg
agggccacagctgacactctgcagggacccatccagtcagcctacagggaggccttccag
agcgtcgtactgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgat
accttcaagcagggcacacaggaatatatccagcagctggaggctcacttgaagaacaag
aaggtacgagagcaggaagtgcgggacccgctgctgaaccagcttcggcagctcatcagc
accttccagagcaccacggagcagctggcgtccaccatcgcagccagtgtccatgctgag
gtgcagcaccagctgcacatcatcgtgggcaacatgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacc
tcgagcattgtccaggcaatgcgctcggcagccgggacacccatcccctctactcacatg
gatttccagtcccagcagactcacatccttcagctcctccagcagggacacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaacctggttctatatgtctgtgagact
gtggatactcagcaagtatttggacagcatccatgccctctgtcccagcctgtgctgctc
tccctcattcagcagctctcctcagatctgggcacacggacagaactgaagttgaactac
ttggaggatgcagtgatgcacctggaccaaagcgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcaaaagctcttccagttcctccaggtggaaccccacaac
cctctgagcaaacctgcgcgtcgcctcatgatcatgctccagggcctggtcacccctggc
atgacctag
DBGET
integrated database retrieval system
