Pseudopodoces humilis (Tibetan ground-tit): 102101436
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Entry
102101436 CDS
T02921
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102101436 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102101436 (SMARCC2)
03036 Chromosome and associated proteins [BR:
phi03036
]
102101436 (SMARCC2)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102101436 (SMARCC2)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102101436 (SMARCC2)
PBAF complex
102101436 (SMARCC2)
GBAF(ncBAF) complex
102101436 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
102101436
NCBI-ProteinID:
XP_014117817
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDPPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVTRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEMEELVSETVKGKPELQQPTSASQQMLNFPEKGKE
KPADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPR
VASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDE
PERIEESGAEEARAEAQPAEEKKEAKEPRDGTAEEEAKEKPGETPKKEEEKGKEVEGEKE
PDKGDGDSAGEPEKDKEVKEGPDEVPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQHLQQQQQQQQPPLPPGAQPLPAAAAPLAPAAHPLAAP
PAPAMVAPAPFPGQQPPPSQSLAGTLGGGSGGGSSSSSSSSGHPAVPGNATAALPFGLPA
PPVAPSMANPPCDPFPSNPAPLPLHGALASSMPGVGGLPPNSHPAPPPLPGGSAAAHSPA
IVAAVQGSLLPNPGLLAGEKFWGYREREGRAGVVHGRWGRGDALLCSPHPPV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgcccctcaccaagctgccgatcaaatgc
ttcctggatttcaaggcggggggagccctgtgccacatcctggcagccgcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcgcatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggctcggccc
aacatcttcctgcaccaggagatcgagcccaaactgctggggaagctcaaggacatcgtc
aagaggcaccagggcaccgtgaccgaggacaagagcaacgcgtcccacatcgtctgcccc
gtgcccgggaacctggaggaagaggagtgggtccggcccgtcatgaagcgtgacaagcag
gtgctgctgcactgggggtactaccccgacagctacgacacctggatcccggccagcgag
atcgaggcgtccgtggaggatcccccgacaccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggattacgaggtgacg
gacgagaagagccccgtcacccgcaggaagaagatctcggccaagaccctgacggacgag
gtgaacagccccgactcggaccggcgggacaagaaggggggcaactacaagaagaggaag
cgctcgccctccccctcgcccacccccgaggccaagaagaagaatgcgaagaagggaccc
tccaccccctacaacaaatccaagcgtgggcaccgcgaggaggagcaggaggacctgacc
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcaccctgcccaaaacg
gtcaacaccaagaaggactcggagtcggcgcccgtcaaggggggcaccatgacagacctg
gatgagcaggaagacgagagcatggagacagccggcaaggacgaggaggagaacggcacg
ggcagcaaaggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgcgccctgcccgagttcttcaacggcaaaaacaaatccaagacccccgag
atatacctggcctaccgtaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccacggcctgccggcgcaacctggccggcgacgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgcccacctctcacttccacgtgctggccgacaccccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatggaggagctggtcagcgagacggtgaaggggaagccggag
ctgcagcagcccacctcggcctcgcagcagatgctcaacttcccggagaagggcaaggag
aagccggcggacatgcagaacttcgggctccgcaccgacatgtacaccaagaagaacgtc
ccgtccaagagcaaagctgccgccagcgccacgcgggagtggacggagcaggagacgctg
ctgctgctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtg
ggcagccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccc
tacctggaggactcggaggcctccctgggacccctggcctaccagcccatccccttcagc
cagtcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgt
gtggcctcggccgctgccaaatcggctctggaggaattctccaagatgaaggaggaggtg
cccacggcgctggtggaggcccacgtgcgcaaggtggaggaggcggccaaggtgacgggc
aaggccgaccccgccttcgggctggagagcagcggcatcgccggcaccacctcggacgag
cccgagcgcatcgaggagagcggggcggaggaggcgcgggcagaggcgcagccggccgag
gagaagaaggaggcgaaggagccccgggatggcaccgccgaggaggaggccaaggagaaa
cccggggagacccccaagaaggaggaggagaaggggaaggaggtggagggagagaaggag
cccgacaagggtgacggtgacagcgcaggtgagcccgagaaggacaaggaggtgaaagag
gggccggacgaggtgcccaaggagcccccggagcccgaggccgagcgcaaggccaaggtg
gagcgggacatcggcgaggggaacctgtccacggccgccgccgccgcgctggccgccgcc
gccgtgaaggccaagcacctggcggccgtggaggagcgcaagatcaagtccctggtggcg
ctgctggtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggagctg
gagaccatcatggaccgcgagcgcgaggccctggaataccagcggcagcagctgctggcc
gaccgccaggcgttccacatggagcagctcaagtacgcggagatgcgcgcccggcagcag
cacttccagcacctgcagcagcagcagcagcagcagcagcccccgctgcccccgggggct
cagcccctgcccgccgccgccgcccccctggcccccgccgcccacccgctggccgctccg
cccgccccggccatggtggccccggcaccattccccgggcagcagccgccgccctcgcag
agcctggcggggaccctcggcggtggcagcggcggcggcagcagcagcagcagcagcagc
agcggccaccccgccgtgcccggtaatgccaccgcggccctgcccttcggcttgcccgcg
ccccccgtggccccgagcatggctaaccccccgtgcgaccccttcccctctaacccggcc
cccctcccgctgcatggggccctggccagcagcatgccgggggtgggggggctgcccccc
aactcccacccggccccgccgccgctgccggggggctcggccgccgcgcacagccccgcc
atcgtggccgccgtgcagggaagcctccttcccaaccccgggctcctcgcaggtgagaaa
ttttgggggtatcgggagcgcgaggggcgggcgggggtcgtgcatggacggtggggaagg
ggcgatgctctcctgtgctccccccaccccccggtttga
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integrated database retrieval system
