Pseudopodoces humilis (Tibetan ground-tit): 102101524
Help
Entry
102101524 CDS
T02921
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102101524 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102101524 (DDX46)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102101524 (DDX46)
Spliceosome [BR:
phi03041
]
Complex A
U2 snRNP components
U2 related factors
102101524 (DDX46)
Complex B
102101524 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
102101524
NCBI-ProteinID:
XP_014108664
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEK
TEGVEVSKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
LEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctctgcatcccggggccgctccgggagc
cgttccaggagtcgttccccatcagacaagaggaaacgtgaggacaggcgctccaggagc
agggatcgggatcgcagacgggagaggtcacgcagcagggacaagagacggtctcgctca
cgggacagaaagcgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaga
agacgatcccggagccgagagaggcggcgttccaggagcaggagtagagggagacggtct
cgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaag
acagaaggtgtggaggtttccaaagaaaagaaaaaagacaaagatgacaaagaggaagag
aaggataaagatgctactacaaatgctgtggccactgagaattttgatcagaacaaacta
gaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagagcaacgcaag
aaggcaatggaaaacataggagagctaaaaaaagaaattgaagaaatgaaacaggggaaa
aaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaa
ggcaatgaggttgaagatgaggagttagatcccttagatgcttatatggaagaagtaaaa
gaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaa
actggaccaactgttaccaaggtggtaactgtggtgacaaccaaaaaggcagctgctgag
tccgaaaagaagaaaggggaactcatggagaatgaccaagatgcaatggagtattcctca
gaagaggaggaagttgatcttcagactgccctgactggctaccagaccaagcagagaaag
ctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaacttctat
gttgaagtaccagaactagctaaaatgactcaagaagaggtaaatgtgtacaggctggag
ctggagggaattacagtcaagggaaaaggctgccccaaaccaataaaaacctgggtacaa
tgtggtatttccatgaagattctcactgccctcaaaaaacatggttatgaaaagcccact
cctattcaaacccaggctatcccagcaattatgaatggacgggatttgattggcattgcc
aaaacaggaagtggcaaaactattgcatttctattgccaatgttcagacacattatggat
cagagagcattagaagaaggagaaggtcccatagctgtcattatgacgcctacgcgtgag
ttggctttgcagattaccaaggagtgcaagaaattctcaaagacacttgggcttcgagtt
gtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaacctccgtagagtcacttacgttgtgcttgatgaagctgacaggatgtttgac
atggggtttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagact
gtcatgttctctgctacttttcccagagctatggaggccctggctcgcaggatcctcagt
aaacctatagaggtgcaggttggaggcagaagcgttgtctgttctgatgtggagcaacac
gtgattgtcatagaagaggagaacaagtttctgaagttactggagctactgggacattat
caggagaaaggatccgttatcatatttgtagataagcaagaacatgctgatgggctgttg
aaagatttaatgagggcctcttatccttgcttgtctcttcatggaggtattgatcagtat
gacagggacagcatcattaatgacttcaagaatggaacctgcaaacttctggtggccacg
tctgtagcagcgaggggcttggatgtgaagcagctgatgctggtggtcaattacagctgt
cccaaccattatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataaa
ggatatgcatatacattcattactgaggatcaggcacgttatgctggtgatatcattaag
gctttggaattgtctgggaatccaattcctactgatttggagaagctctgggctgacttc
aaagaccaacagaaggctgagggaaaattgattaaaaaaagcagtggattctctggcaaa
ggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaagaagctacaaaaa
gcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaa
attgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcgccaggaacatca
aatgctcctacaccatcagctgggaatgcagaaaaattggaaattgctaaaagattggcc
ttgagaatcaatgctcagaagaatcttggagcagaggcacaagtcatggttcccttccac
tttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaagct
cctactgtgtctgccaagacgattgcagagcaactggctgaaaaaatcaatgccaagctc
aattatgtacccatagagaagcaggaggaagagaaacaggatggaggacagaatgaatcc
ttcaagagatatgaagaagagttagagatcaatgacttcccacagactgccagatggaaa
gttacctccaaggaagcactgcagagaatcagtgaatattctgaagctgccattacaatc
aggggaacttacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttg
gctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaggagctcatcagattgcaaaattcttaccaacctaccaacaaaggaagatac
aaagttctatga
DBGET
integrated database retrieval system
