Pseudopodoces humilis (Tibetan ground-tit): 102101589
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Entry
102101589 CDS
T02921
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102101589 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102101589 (CPSF3)
03019 Messenger RNA biogenesis [BR:
phi03019
]
102101589 (CPSF3)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102101589 (CPSF3)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102101589 (CPSF3)
U7-dependent histone pre-mRNA processing factors
102101589 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
102101589
NCBI-ProteinID:
XP_005521987
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLCYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVNKISKKIDMDVYRKRMEIMLQDMFGEDCVSSKDDSVLCITVDGKTANISLDTRTV
DCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagcgcaaagctgaggcgctgatcccggccgaggagagcgaccagctgctt
atccggcccctaggtgctggccaagaagtaggaaggtcatgcatcattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccatcctggactggaaggaatggatgctctt
ccttacattgatttgatagatccagctgaaattgatctcctcctcattagtcacttccat
ttagatcactgtggggctttgccatggtttttacagaaaacaagttttaagggaaggaca
tttatgactcatgccacaaaagctatttacagatggctgctttcagactatgttaaagtc
agtaacatctcagcggatgacatgctatacacagaaacagacctggaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgc
taccacgcaggccatgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
ctgttatatacaggtgatttctcaaggcaggaagacagacacctgatggcagctgagatt
cccaatatcaaaccagatattcttataattgaatccacatatggcactcacattcatgag
aagagggaagagcgggaggcgcgattctgcaacactgttcacgacatcgtgaacagaggg
ggtcgaggtctcatccctgtgtttgccctgggtcgagctcaagagctgctcctaatctta
gatgaatactggcagaatcatcctgaactccatgatatccccatatactatgcttcttct
ttggcaaagaaatgtatggcagtttatcagacgtacgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccttttgttttcaagcatattagtaatctgaagagt
atggatcactttgatgacattggcccaagtgttgtgatggcttccccaggtatgatgcag
agtggcttatccagagagctgtttgagagctggtgcacagataagagaaatggagtcatt
attgcagggtactgtgtagaaggaactcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactccccctgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacagactagtgaatttatccgggccctgaaacctccacat
gtgattttagttcatggtgagcagaatgaaatggccagactgaaagcagcattgatacgg
gagtatgaggataatgatgaagttcatatagaagttcataatcccaggaatactgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtcatgggatctttagcagataag
aaaccagagcaaggacagagaatttctggaatcctagttaaaagaaattttaactatcac
atcctttctccatgtgatctctccaattacacggacctggcgatgagcacagtgacccag
acacaggccattccctacacaggccctttcaatctgctttgttaccagctgcagaaactc
actggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacactgtgacaacagtgatactggaagttcagtcaaatcccaaaata
cagaaagctgcagtaaataagatttccaaaaagatagatatggatgtatataggaagaga
atggagatcatgcttcaggatatgtttggagaggactgtgtgagttccaaagatgactcg
gtcctgtgcatcacagtggatggaaagactgccaacatttccctggacactcggacggtt
gactgtgagccaggaagtgaagatgacgaatcccttcgcgaaatggtggaactggcagca
cagaggctttatgatgccctcagccctgtatactga
DBGET
integrated database retrieval system
