Pseudopodoces humilis (Tibetan ground-tit): 102101986
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Entry
102101986 CDS
T02921
Symbol
SSPO
Name
(RefSeq) SCO-spondin
KO
K24434
SCO-spondin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phi04990
]
102101986 (SSPO)
Domain-containing proteins not elsewhere classified [BR:
phi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102101986 (SSPO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWD
Ldl_recept_a
TIL
TSP_1
C8
TSP1_spondin
VWC
Motif
Other DBs
NCBI-GeneID:
102101986
NCBI-ProteinID:
XP_005532177
LinkDB
All DBs
Position
Unknown
AA seq
3075 aa
AA seq
DB search
MARVTGPGVPEGVVATAVLWVTAVGAATGRWCERTVQVTEHEEVTPRREAAVPCPSLYQY
SLAGWRLDRDRTRRERGNSPGDTGGDPPLCHIYRPPELQPVLRNRTERGCCPGWSGARCT
EGPGSLGRCFSAWQCQDGAGGRNGSAMSRAECCQHPWGHSWSRRHRSPPATCQAWAGTRF
RTFDGRHFGFAGSCRYSLATATDGTWDITVGLGHPRVLLMTFGTAAVVAEGRNVSVNGAA
VPEGRPYLHKGLGVTWPGDWVAVASSLGVRVAWDGHLAVTVTAEPELRGATWGLCGTYTD
DPADDFVRPDGAIAAFAAAFGNSWKVPVAATEVDPSGFYAACVALLCGDRDPVSPPGPLS
PPGPLSGPLTPPGPLSLPDPLSPPGPLSGPLSPPGPPPPAACDTFAAYSRECSRRQLHVP
WRQPGLCERRCPPGQRFTDCVSLCPVTCGTAGEQGPCHRHCHGGCQCGPGLARDGPSCVP
AAACPCHHRRQRYEPGQSIRQRCNRCTCEGGRWRCEQQRCPAECAVLGGRHFVTFDRRRF
SLPAPCAHTLLEDFVAGRLLITAEHEPCDSHLGCPRSLTVTTNRTTARLHGTGEVTVAGR
EVTLPFSGSELSIRRASSAFLHLQLPDAHILWGLGTPDTFVTLQPAMAGAVRGLCGTFNG
DQRDDFTTPAGDVEPGAAAFANAFRAAGACPALGPGVPDPCAAFPGSRERAEAACAVLMG
PAFQPCHRAVDPEPFLELCRWDVCSCRERDRERCLCPALGAYGRECAREGTELEWRNRSL
CDEPCPGGQQYRDCGGPCGRSCSEPPGASDCPPPDTLCVPGCRCPPGLLLAQGGQCVPPA
ACPYPRGARLYPPGPRIRRGCQACVCAGGSWRCAPAPCPPAPRCPPGLLHSPGSCLRRCD
PAEPSGTCGGPADGCVCPPGTLFLGGRCVSPDECPCHHGGRLYPPNATIARDCNTCVCRR
QRWRCGREECAGTCVATGDPHYVTFDGRAFTFAGDCEYLLAREASGLFAVTAENVPCGAT
GVTCTKSVVVAMGNTVVHMLRGREVTVNGVAVRPPKVFGGSGLALQRAGLFLLLLTRLGL
AVLWDGGTRVYVRVSPRLRGRLAGLCGNFDGDAENDFGSRDGALEATPEIFGDSWRLSPL
CPEADGHRPHPCDDSPQRSAWARGRCGVLQHQLFAPCHELVPPQRFYEWCLFDASLQCEG
GQEYNPCGPPCPPTCRDLGREPPELCGALGCLEGCFCPPGRVLHEGLCLEPPACPCFWDG
FAFPAGATVSQGCSNCTCLEGRWQCPPTPSPCPAAPGCAPWEFQCRGGGLCVPGAWLCDN
EDDCGDGSDELCDPPCAPQQPRCPGGRCLPWGARCDGVTQCPDGWDEAGCPPLPCAPPEF
ACAGGRCLPPARVCDGRLDCPPGDDSDEAGCAPRCGPGQFRCGGGRCVPYPQRCDGRDDC
GDGSDESGCPCPEGHLPCPGGGCQPPAALCDGRRHCPDGADEADCPARATCVPGTVPCPD
GSCVPEVAVCDGSRDCRDGWDESPAGCAVALPPAPLAPGTGIVTATGTAGTATGTIGTAT
VTIVTAAGTATGTAVTADTVIAVTGAIGTVANAVTVSDTDTVADTAPGTAAVADTVAVPV
PAGPSAGPCPARSLRCDSGGCVPRGWRCDGDSDCPDGSDERGCDPPCAPGHLPCDPPCDP
GLAPCAPACVPPRRLCDGVPQCRDSADESPQLCEPPGPGSSPRGPCTEFDCGDGECVTFQ
QVCDGVRDCGSGGDERGCGRWGSWGPWGSCSRPCGPGGQRRTRGCHQSHPGLLRACRGPR
EQERPCFHRACPVDGAWGPWGPWSDCPGGCGGVRLRRRGCQPPQNGGRACEELPGGTPCA
PGGCPNASECAEGLRPLPCAPCPASCADLAAAVTCPRPPPCRPGCWCPAGRVLDAPEPGA
GPGGCVRPRECPCRAGGLRYPPGAPVPLGCRLCSCLEGRLRHCRPQPGCSVDCGWSSWSP
WGSCGGPCGTPGVQWSFRSPSNPARRGGGRHCRGIYRKARRCRTVPCGRCRERGRGRVPG
ERWRGGPCQVCQCLAGGAVRCVPYCPLRLSGCPQVSGGRGGRRGPQVAVAVTLPVSPGPG
DNGTATPPGMTTALSPPAPAEGPGPTAGPEGPPPSGWPRSAEPPPEPPSAAGGTPRTETP
PEDTPRPPGGSATPHEPPQLRVLPSLVPTGVTPATPPGCAPPPWGGWGSCSRSCGVGVSL
RRRGETPPEGGCAHPPNIDSRVCFVRACPGTPDPRTGCDPRHDGDPPGGRDPRACGVPAG
VLGVPGNRGPPESCGWSRWTPWTRCDCGTGTRQRFRSPTNPSAAAGGAPCPGSPREVRGC
PELCGPEAGCPPGRTFRECGGGSGCPRSCAHLGGAVGCAGGCQEGCHCPPGTFLHRHSCL
QQCPCSVPAALLRGGTAGTPPGTPPGDPPISCLWGRLRCPPCGETPTETPTCPSPPCAAP
PCLTPPCPCRWSPWGSWGSCSRPCGGGQQRRLRAFAPPGPGDPWCPQIRGGHEQRRPCGV
EACRVNGAWSPWGPWSRCDVTCGGGRSVRSRSCSRPPPKNGGSPCPGGGHETPIPPGGAG
GACGPPQEQVRGCEQSPCPPVCPWAGGERGLGERWSPGPCRQCTCTPEGPECWDTPCAAE
PCDWSPWGSWGPCGDPCAGGSRLRHRHPLNPETPGRACAGVRTQSESCSSSACPDPRCGG
GGRTPSPCAGRCPRTCGDTWGQVLCLQGPCEPGCRCPPGQLLQDGVCVPLSRCRCGTPGG
DNGSREVSPGAATRIGCHNCTCENGTLTCPVLACPSPGPATPAVPVSPCCGGGTRRRHRQ
CREGPGAGPRCGGSPAEETAACNPQECPASGSPATPGTLVTPDTSSTPRTPATLATLGPP
AALGTARAPARCACAPGRYRNGSGHCVSAGGCGCRYRGEHRAAGSEWQERCGTCRCSEGR
VTCATSCPALTCPEGTEPVREPGSCCPVCRDEWPEEPPGPCRLLTALRSIAKGACVLRGV
RVTYCAGTCRSRTAVSAQEPFVRALCECCSYRLDPARPVRALLLPCPRGRPRPALLPRIA
HCRCEPCRGGDSTRR
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagtgacggggccgggggtccccgagggggtcgtggccaccgccgtgctctgg
gtgacagccgtgggggcagccacagggcgctggtgcgagcgcacggtgcaggtgacggag
cacgaggaggtgacgccgcggcgcgaggccgccgtgccgtgtcccagtttgtaccagtac
agcctggccgggtggcggctggaccgggaccgcacgcgccgggaacgcggcaattccccc
ggggacaccggcggcgacccccccctctgccacatctaccgacccccggagctgcagccc
gtgctccggaaccgcacggaacgcggctgctgtcccggctggagcggagcccgctgcact
gagggtcccggctccctgggccgctgtttcagcgcgtggcagtgccaggacggcgccggt
ggccgcaatggcagcgccatgagccgcgccgagtgctgccagcacccctggggacacagc
tggtcccggcgccaccgcagccccccggccacgtgccaggcctgggccgggacgcgcttc
cgcaccttcgacgggcggcacttcggcttcgccggctcctgccggtacagcctggccacg
gccaccgacggcacctgggacatcaccgtggggctcggacacccccgggtgctgctgatg
acgttcgggacggccgcggtggtggccgagggacggaacgtgtcggtgaacggggcggcg
gtgccggagggacgcccgtacctgcacaaagggctcggtgtcacctggccgggtgactgg
gtggccgtggccagcagcctgggcgtgcgggtggcctgggacggtcacctggcagtgacg
gtgacagcagagcctgaactgcgcggtgccacctgggggctgtgcggcacctacaccgac
gaccctgcagacgatttcgtgcgccccgacggggccatcgctgccttcgccgccgccttt
ggcaactcctggaaggtgccggtggctgccacggaggtggaccccagcggcttctacgca
gcgtgtgtggcactgctgtgcggggacagggaccctgtgtcccctcccggtcccctgtcc
ccccccggtcccctgtccggtcccctgacaccccccggtcctctgtccctccccgatccc
ctgtccccccccggtcccctgtccggtcccctgtccccccccggtcccccgccccccgcc
gcctgtgacaccttcgccgcctactcccgggagtgctcccgccgccagctccacgtcccc
tggcgccagcccggtctctgcgagcgccgctgtcccccgggccagcgcttcaccgactgc
gtgtcgctgtgcccggtcacctgcggcacggcgggcgagcagggcccgtgccaccggcac
tgccacggcggctgccagtgcggcccggggctggcccgggacggcccgagctgtgtcccc
gccgccgcctgcccctgccaccaccggcgacagcgctacgagcccggccagagcatccgc
cagcgctgcaaccgctgcacgtgcgagggcggccgctggcgctgtgagcagcagcggtgc
ccggccgagtgcgcggtgctggggggacgtcactttgtcaccttcgaccgccgccgcttc
tccctgcccgccccctgtgcccacacgctgctggaggacttcgtggcggggcggctgctg
atcacagccgagcacgagccctgcgacagccacctcggctgtccccgcagcctcactgtc
accaccaaccgcaccacggcccggctgcacggcacaggggaggtgacagtggccgggcgg
gaggtgacgctgcccttctcgggctccgagctgagcatccgccgcgcgtcctccgccttc
ctgcacctgcagctgcccgacgcccacatcctctggggcctggggacccccgacaccttc
gtgaccctgcagcccgccatggccggcgcggtgcgggggctctgcgggaccttcaacggg
gaccagcgcgacgacttcacgacgccggcgggggacgtggagccgggagcggccgccttc
gccaacgccttccgtgcggccggagcctgcccggcgctgggccccggcgttcccgacccc
tgcgccgccttccccgggagccgggagcgcgccgaggccgcctgcgccgtgctcatggga
ccggccttccagccgtgtcaccgcgccgtggatccggagccgttcctggagctgtgccgg
tgggacgtgtgctcctgccgggaacgggaccgggagcgctgtctgtgccccgcgctggga
gcctacggccgggaatgcgcccgggagggaaccgagctggagtggaggaaccggagcctc
tgcgacgagccgtgtcccggggggcagcagtaccgggactgcgggggtccctgcggccgt
tcctgctcagagccccccggagccagtgactgtccccctccggacaccctctgtgtcccc
ggctgtcgctgccccccggggctgctgctggcccaggggggtcagtgtgtcccccccgcc
gcctgcccgtatccccgcggcgcccgcctgtacccccccggcccccgcatccgccgcggc
tgccaggcctgtgtgtgcgcgggggggtcgtggcgctgcgcccccgccccgtgtcccccc
gccccgcgctgtcccccggggctgctgcactcaccgggctcctgcctgcgccgctgcgac
cccgccgagccctccggcacctgcggcggccccgccgacggctgcgtgtgcccccccggg
accctcttcctgggcgggcgctgcgtgtccccggacgagtgtccctgtcaccacggcggg
cggctgtacccgcccaacgccaccatcgcccgcgactgcaacacctgcgtgtgccggcga
cagcggtggcgctgcgggcgcgaggagtgcgcggggacctgcgtggccacgggggacccg
cactatgtcaccttcgatggccgcgccttcaccttcgcgggggactgcgagtacctgctg
gctcgcgaggcctccgggctcttcgctgtcaccgccgagaacgtcccgtgcggtgccacc
ggcgtcacctgcaccaagtcggtggtggtggccatggggaacaccgtggtgcacatgctg
cggggacgggaggtgacagtgaacggggtggccgtgcgacccccaaaggtgttcgggggc
tcggggctggcgctgcagcgagcggggctcttcctgctgctcctcacgcgcctggggctg
gccgtgctgtgggacggagggacccgcgtgtacgtgcgcgtgtccccgcggctgcggggc
cgcctggccgggctctgcggaaacttcgacggcgacgccgagaacgatttcgggagccgg
gacggggccctcgaggcgacccccgagatcttcggggactcctggcgcctcagccccctc
tgcccggaggccgacgggcaccgcccgcacccctgcgatgacagtccccagcgctcggcc
tgggcgcggggtcgctgcggggtcctgcagcaccagctcttcgccccctgccacgagctg
gtgcccccccagcgcttctacgagtggtgcctgttcgacgcctccctgcagtgcgagggg
gggcaggagtacaacccctgcggccccccctgcccccccacctgccgcgacctcggccgg
gagccccccgagctctgcggggccctgggctgcctcgagggctgtttctgcccccccggg
agggtcctgcacgaggggctgtgcctggagccccccgcctgcccctgcttctgggacggg
ttcgccttcccggccggggccaccgtgagccagggctgcagcaactgcacgtgtctcgag
gggcgctggcagtgccccccgaccccgtccccgtgtcccgccgcccccggctgcgccccc
tgggagttccagtgccggggcgggggtctctgcgtgccgggggcctggctctgcgacaac
gaggacgactgcggggacggctctgacgagctgtgcgaccccccctgcgccccccagcag
ccccgctgccccggcgggcgctgcctgccctggggggcccgctgtgacggtgtcacccag
tgtcccgacggctgggacgaggcggggtgtcctcccctgccctgcgccccccccgagttc
gcctgtgccgggggtcgctgcctcccccccgcccgggtctgcgacgggcggctcgattgt
ccccccggggacgactcggacgaggcgggctgcgccccccggtgcgggccggggcagttc
aggtgcggggggggccggtgtgtcccgtacccccagcgctgcgacggccgcgacgactgc
ggggacgggagcgacgagagcggctgtccctgccccgaggggcacctgccgtgtcccggg
gggggctgccagccccccgccgctctctgcgacggccgccgccactgccccgacggcgcg
gacgaggccgattgtcccgcgcgggccacctgcgtccccggcaccgtcccgtgtcccgac
ggctcctgcgtaccggaggtcgccgtgtgcgacggctctcgcgactgtcgcgacggctgg
gacgagagtccggcggggtgcgcggtggcgctgccgcccgcgccgctggcacctggcacc
ggcattgtcaccgccactggcaccgctggcaccgccactggcaccattggcaccgccact
gtcaccattgtcaccgccgctggcaccgccactggcaccgccgtcaccgccgacactgtc
atcgcggtcaccggcgccatcggcactgtcgccaacgctgtcactgtcagtgacactgac
actgtcgccgacaccgcccccggcaccgccgctgtcgccgacactgtcgctgtccccgtc
cccgccgggccctcggccgggccctgtcctgcccggtccctgcgctgcgacagcggcggc
tgcgtcccgcgggggtggcgctgcgatggcgacagcgactgtcccgatggcagcgacgag
agaggctgcgaccccccgtgcgcccccggccacctgccctgcgaccccccctgcgaccct
ggactcgccccctgcgcccccgcctgcgtcccccctcgccgcctctgcgacggcgtcccc
cagtgtcgcgacagcgccgacgagagcccccagctgtgcgagccccccggccccgggagc
agcccgcggggtccctgcacagagttcgactgcggggacggggaatgtgtcacctttcag
caggtgtgtgatggggtgcgggactgcggctcgggtggggacgagcgggggtgcggccgc
tgggggtcctgggggccctgggggtcgtgcagccgcccctgcgggcccgggggacagcgc
cgcacgcggggatgtcaccagagccacccggggctgctgcgagcgtgccgggggccgcgc
gagcaggagagaccctgcttccaccgggcctgcccggtggacggcgcgtggggcccgtgg
ggaccctggtccgactgcccggggggctgcgggggggtccggctgcgcaggaggggctgc
cagcccccccagaacggcggccgcgcctgcgaggagctgcccggggggaccccctgtgcc
ccgggggggtgccccaacgcctcggagtgcgcggaggggctgcgccccctcccctgcgcc
ccctgccccgcctcctgcgccgacctggccgccgccgtcacctgcccgcggcccccgccc
tgccgcccagggtgctggtgcccggcggggcgggtgctggacgcccccgagccgggcgcg
gggcccggggggtgcgtgcggccccgggagtgcccgtgccgggccggggggctccggtac
cctccgggagccccggtgccgctcggatgtcgcctctgctcgtgcctcgagggtcgcctg
cgccactgccgcccccagcccggctgctcagtggactgcgggtggtcgtcgtggtcgccg
tggggctcgtgcgggggcccgtgcgggacccccggtgtgcagtggtccttccgcagcccc
tccaaccccgcccgccgcgggggggggcggcactgccgcggcatctaccgcaaggcccgg
cggtgtcgcacggtgccgtgcgggcggtgccgggagcggggccgggggcgcgtccccggt
gagcgctggcgcgggggtccctgccaggtgtgccagtgcctggcgggcggggccgtgcgc
tgtgtcccctactgtcccctccgcctgtccggctgtccccaggtgagcggggggcgcggg
gggcggcgcgggccgcaggtggcggtggcggtgacgctgccggtgtccccagggccaggt
gacaacggcacggccaccccgcccgggatgacgacagcgctgtccccccccgcgccggcc
gagggtcccggccccacggccgggcccgaggggccgcccccctcagggtggcccagaagc
gccgagccccccccggagccccccagcgctgccgggggcacccccaggacggagaccccg
cccgaggacaccccgagaccccccggaggctccgcgaccccccacgagcccccccagctc
cgcgtgctgccctcgctggttcccacgggggtcacccccgcgacccccccaggctgcgcc
cccccgccctggggggggtgggggtcctgcagccgctcctgcggggtgggggtctctctg
cggcgccggggggagaccccgcccgaggggggctgcgcccacccccccaacatcgacagc
cgcgtctgcttcgtgcgagcctgcccaggtacccccgacccccgaacgggctgcgacccc
cggcacgatggggaccccccggggggccgggacccccgcgcctgtggggtccctgcaggg
gtcttgggggtccccggaaatcggggcccccccgagtcctgcgggtggtcgcgctggacc
ccctggacccgctgtgactgcggcaccgggacccggcagcgcttcaggtctcccaccaac
ccctcggccgcggcgggcggtgccccctgccccgggagcccccgagaggttcggggctgt
cccgagctctgcggacccgaggccgggtgcccccccggccggaccttccgcgagtgcggg
gggggctccgggtgtccccggagctgcgcccaccttgggggggccgtggggtgcgcgggg
gggtgccaggagggctgtcactgcccccccgggaccttcctgcaccgccactcctgcctg
cagcagtgcccgtgctcggtgccggccgcgctgctgcgggggggcacggccgggaccccc
cccgggaccccccccggggaccccccgatctcctgcctgtggggccgcctgcgctgcccc
ccctgcggtgagacccccacggagaccccgacctgcccgagccccccctgcgccgcgccc
ccctgcctgacgcccccctgcccgtgccggtggagcccctgggggtcctgggggtcgtgc
tcgcggccctgcgggggggggcagcagcggcggctccgggccttcgccccccccggcccc
ggggacccctggtgcccccaaatccgggggggccacgagcagcggcggccgtgcggggtg
gaggcgtgtcgggtgaacggcgcgtggtccccgtggggtccctggtcgcgctgtgacgtc
acgtgcggggggggccgctccgtgcgcagccgctcgtgctcccgacccccccccaaaaac
gggggcagcccctgccccgggggggggcacgagacccccatcccccccgggggcgcgggg
ggagcgtgcgggcccccccaggagcaggttcgggggtgcgagcagagcccgtgccccccc
gtgtgcccctgggcggggggcgagcgggggctgggcgagcgctggagccccgggccgtgc
cgccagtgcacctgcacccccgagggacccgagtgctgggacaccccgtgtgcggccgag
ccgtgtgactggagcccctgggggtcctggggaccctgcggagacccctgcgcggggggg
tcccgcctgcgccaccggcaccccctgaaccccgagacccccgggcgggcgtgcgcgggg
gtccggacccagagcgagagctgcagctccagcgcgtgtcccgacccccggtgcggcggg
gggggccggacccccagtccctgcgccgggcgctgtccccggacctgcggtgacacctgg
ggccaggtgctgtgtctgcagggaccctgcgagccagggtgccgctgtccccccgggcag
ctgctccaggacggtgtctgtgtccccctgagccgctgtcgctgcgggacccccggcggg
gacaacgggagccgcgaggtgtccccgggggccgcgacacggatcgggtgtcacaactgc
acctgcgagaacgggaccttgacctgcccggtgctggcgtgtccctccccggggcccgcg
acccccgcggtccccgtgtccccctgttgcggcggcgggacccggaggcggcaccggcag
tgccgggagggccccggggcggggccgcggtgcggggggagccccgcggaggagacggcg
gcgtgtaacccccaggagtgtcccgcttccggatcccccgcgacccccgggaccctcgta
actccggacacctccagcaccccccggacccccgcgaccctcgcgaccctcggccctccc
gcggctctcggtaccgcccgtgccccggcgcgctgcgcctgcgcccccggccggtaccgg
aacggctccgggcactgcgtgagcgcggggggctgcgggtgccgctaccgcggggagcat
cgagcggccggcagcgagtggcaggagcgctgcgggacctgtcgctgctccgagggacgc
gtcacctgcgccacctcttgccccgcgctcacctgcccggagggtacggagccggtgcgg
gagcccgggagctgctgccccgtgtgccgggacgagtggccagaggagccccccgggccg
tgccggctcctcacggcgctccggagcatcgccaagggcgcgtgtgtcctgcggggcgtc
cgtgtcacctactgcgcggggacgtgtcgctcccgcaccgccgtcagcgcccaggagccg
ttcgtgcgggcgctgtgcgagtgctgcagttaccggctggacccggcccggcccgtgcgg
gctctgctgctgccgtgtccccgcggccgcccccggcccgcgctgctgccccgcatcgcg
cactgccgctgcgagccctgccggggcggggactccacccggcgctga
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