KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102102271
Entry
102102271         CDS       T02921                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510  Focal adhesion
phi04512  ECM-receptor interaction
phi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102102271 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102102271 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102102271 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phi04147]
    102102271 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:phi00536]
    102102271 (COL4A3)
Exosome [BR:phi04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102102271 (COL4A3)
Glycosaminoglycan binding proteins [BR:phi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102102271 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102102271
NCBI-ProteinID: XP_014111583
LinkDB
Position
Unknown
AA seq 1622 aa
MAVNRSLLRTVYAKVKVPAFVIAQKGEKGFPGVPGPPGQRGFPGPEGPPGPQGPKGSPGL
TGLVGPKGVRGLPGIPGFSGPPGLPGEPGTVGPPGLPGVPGCNGTKGDQGFPGPPGRRGS
PGLPGVAGIKGEKGCPAEGYTQEYGAKGDPGLPGMPGLQGAQGAQGYPGELGPQGPPGPL
GMPGKPGSPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGE
KGSRGPPGPMGFTGLVGDSQSEKGDRGEPGAQGKPGKEGAPGPPGLPGQKGEQGKPGLAG
RQGAKGMKGNPGPHGACGRTEYYDYVVGEKGDEGPPGPPGPKGQRGVPGPQGPPGNAGRP
GVSRPGLRGPPGFPGPKGTKGEKGQTGLCIVGPPGLPGITGRPGSVGLPGPPGEPGRITF
GTGLPGLPGEPGRTGPPGPPGDTGMRGDDARVCTDCRYIPGMPGLPGSPGPRGQDGMPGR
EGTTGPKGSPGSPGTPGFPGAQGSPGFRGDQGRKGSKGEPGYIHPEGPKGERGDPGPRGD
KGRRGSSGFLGRPGSKGSKGSKGEEGLAGSKGDRGLPGLPGVLGLPGEMGLPGLPGYGPQ
GVRGFKGSKGIPGPPGLPGEAGLKGETSRAIPLPALPGPQGPHGLPGLPGVPGRVGARGQ
PGDPGHSGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGPPGCEGKIGDPGRAGNLGQPGQK
GEPGMVIPGEPGRMGSPGGHGSPGSKGESGLPGLPGLPGHPGYDGDDGLRGDRGSPGVPG
DPGFPGKPAECLIGLPGLPGGQGATGPPGERGLQGSKGNLGPPGLSIPGIYGKPGEPGLT
GLQGYTGLPGPKGESGRPGISGLPGARGDPGVMGLLGIPGPPGMVGRPGNPGIRGSPGFP
GIKGRKGFLGEKGEPGDKGFPGPSETLVGIGDKGERGLRGVQGQMGIRGEKGDAGVQGPP
GVDGPEGMPGLPGDKGFMGLPGVPGRQGFPGAYGDKGDMGIPGPKGQKGSPGFPGPSGDP
GPPGYGGFPGDKGDPGYPSAGPPGEPGSKGDPGPPGAFGSKGEKGSKGHPGPTGVPGPHG
IRGETGGAGIPGKHGLPGDTGVKGCQGRPGQQGVPGPPGAVGVPGKHGLVGERGTQGQDG
MPGPPGVKGEPGPPGRGIPGLQGIPGRRGIKGDMGLPGFPGPPGVKGHQGDRGPIGPPGL
VGLPGFQGTTGMAITGQKGNRGIPGARGRPGAPGFPGLPGLSTFSMKGSKGVQGADGIPG
PRGPAGDIGPPGPKGIEGQSGYPGARGHPGFLGFPGVKGEKGNQGPPGPHGAEGPRGPKG
QHGPPGVSGKIFSIPGSKGPPGLPGIPGTPGDQGIQGFPGVQGPKGVKGLPGRFGHPGHP
GLPGPKGDRGFPGQRGPPGLIGFPGLQGLPGSPGTVIAGPTRKGFIFTRHSQTTKIPLCP
HGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTMPFLFCSPNDVCSFASRNDYSY
WLSTAVVMPPDMAPISGRALEPQISRCVVCEGAAMVIAVHSQTTVVPACPDGWMSLWKGF
SFVMYTSAGSEASGQALASPGSCLEEFRAVPFIECHGRGTCNYYTNSYSFWLASLNPRRM
FR
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggctgttaacaggagtcttctaagaactgtgtatgcaaaggtaaaagtccctgctttt
gtgatagcacaaaagggtgaaaaaggctttcctggtgttccaggtccacctggtcaaaga
ggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccagggctt
acaggcttagttggacccaaaggtgtacgaggactcccaggaatacccggattttcaggt
cctccaggccttccgggtgaaccaggaactgttggtcctcctgggctcccgggtgttcca
ggatgcaatggcacaaagggtgaccaaggatttccaggtcctccaggtcgaagaggttct
ccaggccttccaggagttgctggtatcaaaggagagaaggggtgccctgcagagggatat
acccaagaatatggtgcaaaaggtgatcctggattaccaggaatgcctggtctccagggt
gcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggaccttta
ggcatgccagggaaaccaggatctcctggacctaagggtcttatgggactgaaagtaata
ggagccaaaggaagaaagggtgacactgggttaaccggacctcctgggccccctggaact
gttattgtgacattaagcggaccagacaacatgacggacttgaaaggagaaaaaggagaa
aaaggatcaagaggacccccagggccaatggggtttacagggctggttggtgattcccaa
agcgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggtgct
ccgggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggctgga
aggcaaggagctaaggggatgaaaggaaaccctggtccacatggagcttgtggtcgaacg
gagtattacgattatgtggttggtgaaaaaggggatgaaggaccccctggacctccagga
ccaaaaggtcaacgtggcgtgcctgggccacagggtcctcctggaaatgctggtagacca
ggtgtgtcaagacctggcctgagaggtcccccaggatttcctgggccaaaaggaacaaaa
ggagagaaaggacaaactggcttgtgtattgtaggccctccaggactgcctggtattact
ggcaggcctggttctgttggattaccaggtcctccaggagaaccaggtagaataacattt
ggaactggcctaccaggacttcctggagagccagggcgtacaggacccccaggacctcca
ggagacactggcatgagaggtgatgatgctcgtgtgtgtactgattgtagatacattcca
ggaatgcctggtcttcctggttctcctgggcctcgtggtcaggatggcatgcctggtaga
gaaggaacaacaggtccaaaaggttctccaggttctccaggaacaccagggtttccaggg
gctcaaggatctccaggttttagaggagatcaaggacgtaaaggatcaaaaggtgagcca
ggatatatacatccagaggggccaaaaggtgagcgaggagatccgggacccaggggagac
aaaggaagaagaggttcaagtggttttctgggaagacctggttctaaaggatccaagggt
tctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggtttgcct
ggtgtacttggacttcctggagaaatggggcttcctggactgccaggttatggaccacaa
ggagtaagaggttttaaaggctctaaaggaatacctggaccacctggattacctggagaa
gctggtctgaaaggagagaccagtagggcaattccattacctgcattgccgggacctcag
ggaccacatggtttacctggactcccaggagtgcctggtagggttggagcaagaggtcag
ccaggtgatccaggacattcaggaccaacaggtgacacaggctttccaggacttgggttt
cctggaaacccaggtccaaaaggagataaaggacttgcaggaggcagaggcccgccaggt
tgcgaaggaaagattggagatccaggacgagctggaaacctaggacaaccaggacaaaag
ggtgagccaggcatggttattcctggagaaccaggaagaatgggttcaccaggaggtcat
ggcagtcctggctcaaaaggtgaaagtggtcttccaggactcccaggcctaccagggcat
cctggctatgatggtgatgatggcctaagaggagatcgtggctcacctggagttcctgga
gacccgggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgccaggt
ggccagggagctacaggcccaccaggagaaagaggtttacaaggctcaaaaggaaaccta
ggtcctcctggtttgagtatcccgggaatttatggaaagcctggagaacctggattaaca
ggtcttcagggatatacaggattacctggtcccaagggagagtctggaaggccaggaatc
tctggtttgccaggtgcaaggggagatccaggtgtaatgggactgttaggaattcctgga
ccccctggcatggttggaagaccaggcaaccctggtatcagaggttctcctggcttccca
ggaataaagggaagaaaaggatttcttggagaaaaaggtgaaccaggtgataaaggtttt
cctggaccatctgagaccttggttggtattggggacaaaggagaacgaggtttaagagga
gttcaaggccaaatgggtataaggggagaaaaaggagatgctggtgtgcaaggtccccca
ggtgttgatgggcctgaaggaatgcctggtctaccaggagacaaaggatttatgggtctt
ccaggggttcctggcagacaaggattcccaggtgcatatggagacaaaggagacatggga
attccaggtccaaaaggccagaagggatctccaggctttccaggaccatcaggtgaccct
ggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatctgct
gggcctccaggagaacctggttcaaagggagatccaggtcccccaggagcttttggcagc
aaaggagaaaagggctctaagggtcatccaggacctacaggagtaccaggaccacatggg
attagaggggaaactggaggtgcaggaatcccaggaaaacatggactccctggagatact
ggtgttaaaggatgccagggccgcccaggacagcagggagtcccaggccctcctggtgct
gttggagtccctggaaaacatggacttgttggtgaaaggggtactcaaggtcaggatggt
atgcctggtcccccaggagtaaagggagaaccaggaccaccagggagagggatccctggt
cttcaaggtattcctggacgtagaggaatcaaaggggacatgggactgcctggttttcct
gggcctccaggtgtgaaaggtcatcaaggagatcgaggacccattggacctcctggctta
gtggggttacctggatttcagggcaccacaggcatggcaattactggccagaaagggaac
agaggtattcctggtgcacgtggaagaccaggtgctcctggttttccaggccttcctggt
ctttccactttcagcatgaaaggaagcaaaggtgtccaaggggcagatggaataccaggg
ccaaggggcccagctggcgacattggccctcctggtcccaaaggaatagaaggtcaatca
ggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaaggagaa
aagggtaatcaaggacccccaggaccacatggtgcagaagggccaaggggaccaaagggc
cagcatgggccacctggagtctctggaaaaatattctccatcccaggaagcaagggtcct
ccaggactgccaggaatcccaggaacaccaggtgatcaaggaattcaagggtttcctgga
gtacaaggacctaaaggagtaaaaggtctaccaggacgttttggtcatccaggtcatcca
ggattgcctggtccaaaaggggacaggggatttccaggacaaagaggaccacctggattg
attggctttccaggtctgcaggggttacctggatcaccaggtactgtcattgctggtcca
acaagaaaaggatttatctttacccggcatagtcagacaacaaagattcctttgtgccca
cacgggacatcccaaatctatgttggctattcgctgctttttgtacaaggaaatgaacga
gctcatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatgcca
ttcttgttctgtagccccaatgatgtttgtagctttgcttctcgcaatgactactcctac
tggctgtctactgcagtggtgatgccaccagacatggcacccatttctggcagggcacta
gagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcggttcac
agccaaacaactgtggttcctgcatgtccagatggctggatgtctctctggaagggtttt
tcttttgttatgtacacaagtgctggctcagaagcttctggccaagcattggcatctcct
ggatcttgtctggaagaatttcgggccgtcccattcatagagtgccatggcagggggacg
tgcaactactatacaaattcctacagtttctggctggcatcattaaatccaagaagaatg
ttcaggtaa

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