Pseudopodoces humilis (Tibetan ground-tit): 102102300
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Entry
102102300 CDS
T02921
Symbol
NHEJ1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102102300 (NHEJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102102300 (NHEJ1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102102300 (NHEJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
102102300
NCBI-ProteinID:
XP_014104737
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MPGAVVCPRLRPGAPRKPVPLHPPAAYSSCPRMEGSEELESSLLTQPWASVRFGESTFLA
KVCFMDTGYILLISDLSSIWYESADAEAVGRRSKELNKRLTVHVSSFLNHLCNLMCPLLA
GQPSATTSFSCHHSPSGLRLHVKSELSGLPFYWDFHCCPAPLEMVFRHLVRPLIQMNLVL
QCQVQELISLVLQKDAEIEDYRESGAALSRDRLRTKPFQEETFQQNFMAETLPQICGAGE
GQAFASALQQLYTAVTQQEAKQARKRHCSDCIFFWYQRTAWIQHPLQKPRSTPIHLLHPR
KMKQHLPAREPRQPPPHLRSPSCLQPRPSQRRQKGSSAERLLRALLPPASKRWSAEHPRI
VCLFSASPGGPYPGHGPLPRCLQLGRWNSFLQQCFRKQLF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagccgtagtctgccctcgcctccggcccggcgcccctcgcaagcccgtgcct
ctgcatcctccggccgcctactcctcctgccctcggatggagggctctgaggagctggaa
agcagcctcctgactcagccctgggcttctgttcgctttggcgagtccacttttcttgcc
aaagtgtgcttcatggacactggctatattctgctgatctctgacctcagcagcatctgg
tacgagagtgcagatgccgaagctgtgggacgaaggtccaaggagctgaacaagcggctg
acagttcacgtgtcctccttcctgaaccacttgtgcaacctgatgtgccccttgctggca
gggcagccgagtgccaccacctccttctcctgccaccactctcccagtggcctcaggctg
cacgtcaaaagcgagctgtcaggactgcccttctactgggacttccactgctgccctgct
cccttggagatggtgttccgtcacctcgtgcggcccctgattcagatgaacctggtgctg
cagtgccaggtgcaagagctgatttccctggtgctccagaaggatgctgagattgaagat
tacagggagagcggggccgctctcagcagagaccgcctgcggacaaaacccttccaggag
gagacgtttcagcagaacttcatggctgagaccctgccccagatctgcggtgcgggagaa
gggcaggcgtttgcctctgctctgcagcagctctacactgcagtgacacagcaggaggcc
aagcaggctcggaaacggcattgctctgattgcatctttttctggtaccagaggacagcg
tggatacagcacccattgcagaaaccacggagcacccccatccacctgctccatcccagg
aagatgaaacaacatcttccagcgagagaacctcgccagcctcctccccatctcagaagc
cccagttgcctgcagccaaggccaagccaaagaaggcaaaagggctcttcagctgaaaga
ttgctgagggctctgcttcccccagcatccaagagatggagtgcagagcacccacgcatc
gtctgcctcttctctgcatctcctggtggaccctacccaggtcacggtcccctcccaaga
tgtcttcagttgggcagatggaactcttttcttcaacagtgtttcaggaaacagcttttc
taa
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