KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102102340
Entry
102102340         CDS       T02921                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X3
  KO
K14409  protein SMG7
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102102340 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phi03019]
    102102340 (SMG7)
Messenger RNA biogenesis [BR:phi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     102102340 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102102340 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 102102340
NCBI-ProteinID: XP_005531356
LinkDB
Position
Unknown
AA seq 1139 aa
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTQWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKKLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLSLFMSFLGVLCKCPLQNDYQDSGASYPL
PAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFEL
QGFLALRPSFRNLDFSKGHQAITGDKEGQQCRIRQQRLIFTGKWIADNQPRLIQCENEVG
KLLFVTEIPELLLEDPSEAKESLALQETSMTELLCADGSPGLKSVLSSGRSLSNSCDAGE
KPMVTFKENIKPREMNREQGRIYPPKDMARERRDFSKGIVANKNDGKKDNNKRKNETKKC
GLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPL
PSRPGFPPPAYVVPPPVAFSMSTGYTFPSGVSVPGTFLQPTAHSPTGNQVQGGKQSHIPY
SQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQAAAQSASQLQVQALAQQQQSPTKVVQGL
GKSPPHHSGFQQYPQTDSSKQLWNPPQVQSSLGKIMSVKQPYYLQAQDPLKLFEQSLQPP
VMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMTDNRVMTQQSNMDRRGKRQGV
FCSEQDAVSRMTFEKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNT
STKAEVTPSAAHQETSLYSLFEGTPWSPSIPASSDHSTPASQSPHSSNPSSLPSSPPTHN
HNSVPFSNFGPIGTPDNRDRRVTDRWKTDKPAMGGFGLDYLPTTSSSSESSWHQSSAPSG
TWAVQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNQPH
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttatat
caaaaaatgctagtgactgatttggaatatgctttagataaaaaggtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaacagagca
aatccgaatcggagtgaagttcaggcgaacctttctctgtttttagaggcagctagtggc
ttctacacacagttattacaggaattgtgcacagtttttaatgtagacctgccgtgccgt
gtgaaatcttcccagctggggatcattagcaataaacagacgcacaccagcgccattgta
aagccgcagtccagctcctgctcctacatctgccagcactgccttgtccacctgggagat
attgctcgctataggaatcagaccagccaggcagagtcttactatagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctatcctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcatcgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcaatggagtgtgtctgacttcatcaaggcctttattaaatttcatggccatgtg
tacctgagtaagagcttggagaaactgagccctcttcgagaaaagctggaagaacagttc
aagaagctgttgttccagaaggccttcaactctcagcagttagtccatattactgtgatc
aacctattccaactccaccacctgcgagacttcagcaacgaaacagagcaacacagctac
agccaggatgagcagctctgctggacacagctcctgtctctcttcatgtcatttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaggactctggggcttcatatcctctt
ccagctgtgaaggtttcgatggactggctgaaacttaggcccagtgttttccaggaggca
gtggttgatgaaagacggtacatatggccctggctgatctctcttctaaatagtttccaa
cctcatgaagaagatctatccaataataatgcaactccccttccagaagaatttgagttg
caaggattcctggctctgaggccctcattcaggaacttggatttttccaaaggccaccag
gcaattacaggggataaagaagggcagcaatgtcggatacgtcagcagcgcctgatcttc
acaggcaaatggattgctgataaccagccaaggttgattcaatgtgaaaatgaggtagga
aagctcttgtttgtgaccgaaatcccagagctcttactagaggaccctagtgaagccaaa
gagagtctcgccttacaggagacatccatgacagagctgctgtgtgctgatgggagccct
ggacttaaatcagtgctgtcctctggcagaagcctgagcaacagctgtgatgcaggcgaa
aaaccaatggtcaccttcaaagagaatatcaagccccgggagatgaacagagaacaaggg
cggatctaccccccaaaggacatggcgagggagagacgggactttagcaaaggaatagta
gcaaataagaatgatgggaagaaggataacaataaaagaaagaatgagaccaagaaatgt
ggcctggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcccag
acagagatgaggaagactccagtatctgaagccaggaaaacacctgtaactcagactcca
agtcaagccagcagttcccagttcatccctattcatcacccaggagccttccctcccctt
cctagccggccaggatttcctcctccagcctatgttgtcccccctcctgtggctttctcc
atgagcacggggtacaccttcccaagcggtgtttctgtcccaggaaccttcctccagccc
acagctcactcacctacaggaaaccaggtgcaaggtgggaaacagtcccacattccttac
agccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacaccacct
ccttcccagcaacccctctcatctttaccagctcaggcagcagcacagtccgcaagccag
ttacaggtccaagctctggctcaacagcagcagtcccccacgaaagttgtccagggcctg
gggaagagcccaccacaccactctggattccagcagtatccacagacagattcatcgaag
cagctctggaacccccctcaagtccaaagctccctggggaagatcatgtctgtaaagcag
ccctattacctgcaggcccaggaccctctcaaactctttgaacagtctttacagcctcct
gtgatgcagcagcagcctctggagaaaaaaatgaagcctttcccaatggagccatataac
cagaacccctcagaagtcaaggtgccagagtattactgggactcttcctatggcatgact
gacaacagggtgatgacccagcagtcgaatatggaccgcagggggaagcggcagggagtc
ttctgctctgagcaggatgctgtctccaggatgacctttgagaagtccctgctggaaaaa
ccatcagaattgatgtctcagtcatcatctttcctgtccctcagtggcttttctctaaat
caggaaagatatccaaacaacagcatgtttaatgaggtatatggaaaaaacatgaatacc
agcacaaaagcagaagtcaccccttcagctgcgcatcaggagacttcactgtattctctc
ttcgaagggactccatggtctccatccattccagccagctcagatcattcaacaccagcc
agccagtctcctcactcctccaaccccagcagcttgccaagctcccctccaacgcataac
cacaattctgttcctttctccaacttcggtcccattgggactccagacaacagagaccgg
agagtcacagaccgctggaaaacagataagccagcaatgggagggtttggtctggactat
ctcccaacaacgtcatcctcttcggagagcagctggcaccagtccagtgctcccagtggt
acctgggcagtccaaggccctcccgccatggaggactcctcagctgtgcttatggagagc
ctgaagtccatctggtccagttccatgatgcaccctggcccctcggccctggagcagctg
ttgatgcagcagaagcagaagcagcagcgcggacaaggcgccatgaatcagccgcattga

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