Pseudopodoces humilis (Tibetan ground-tit): 102102388
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Entry
102102388 CDS
T02921
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi00100
Steroid biosynthesis
phi01100
Metabolic pathways
Module
phi_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102102388 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phi01006
]
102102388 (FDFT1)
Enzymes [BR:
phi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102102388 (FDFT1)
Prenyltransferases [BR:
phi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102102388 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
102102388
NCBI-ProteinID:
XP_005528843
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYHLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSHLYQPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQMEGREFWPREVWSRY
AKKLSDLAKPENMDVAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQVIASIRAISLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTLSKATEDYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctacggaaatggctgggccaccccgaggacatctaccacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgcacctgctaccggtacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggacggagagctgcgacatgcagtctgtatattctacctagttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtcccgatgctgcacgag
ttccactcccatctctaccagccagactggaagtacacagagagcaaggagaaggaccgg
caggtgctggaagacttcccaacgatctccatggaattcaggaacctgtccaaggtctac
caggatgtgatttcggatatttgccacaagatgggtgttgggatggcagagttcttggag
aaaaaggtggattctcagcatgagtgggataagtattgtcactacgttgctgggctggtg
gggattggcctttcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagatctggcaaactccatgggcctcttcctccagaaaaccaacatcatccgtgac
tatctggaggaccagatggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcggaccttgccaagccagagaacatggatgtggctgtgcagtgcctc
aatgagctcatcaccaacgccctccaccacgtccctgacgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaagggc
caggccgtcaccctcatgatggatgccaccaacatacaagctgtcaaagccatcatgtac
cagtacgtggaagagatctaccagaagatcccgagcacggacccctcatccaacaagacg
cagcaggtcatcgcctccatccgcgccatcagcctgcccggcagccccatggcctcccgc
caccactactcgcccatctacctgtcctgtgccatgctcctggcagccctgagctggcag
tacctcagcaccctctccaaggccaccgaggactacgtgcaggcaggggagaactga
DBGET
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