Pseudopodoces humilis (Tibetan ground-tit): 102102429
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Entry
102102429 CDS
T02921
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102102429 (DDX1)
03016 Transfer RNA biogenesis [BR:
phi03016
]
102102429 (DDX1)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102102429 (DDX1)
Spliceosome [BR:
phi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102102429 (DDX1)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102102429 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102102429
NCBI-ProteinID:
XP_005521906
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFDIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYVGLCKAPESSVVKSQHSGNAQVVQAQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKIN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggagatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttctccctacggatatccaagcagaatccatcccgttgatcttgggaggtggt
gatgtacttatggctgctgaaactgggagtggaaaaactggtgctttcagcattccagtt
atccagattgtttatgaaacactgaaagaccaaatggaaggcaagaaaggaaaagccact
attaaaactggaggggcagtgctcaataaatggcaaatgaacccctatgacagaggatca
gcttttgcaattggatcggatggtttgtgttgtcaaagcagagagattaaagaatggcat
ggatgcagagcaactagaggtgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcattagatctgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacgattgggtgttatctagacacagaaaaa
ggacaaataaaattttccaaaaatgggaaggaccttggccttgcatttgatatcccacca
catataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggagaagaagatttcaagtttccaccaaaagatggctatgttggtctttgcaag
gctcctgagagcagtgttgtaaaatcacagcactcaggaaatgcacaagtggttcaagca
cagaaccttccaaatgctccaaaagcattgattgtagaaccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatacgttgataatcccaagttaagggaa
ctgctaatcattggtggagttgctgcaagagatcaactctctgtactggaacaaggtgtg
gatattgttgttggaactcctggaaggctggatgacctggtctcaacagggaagattaat
ttatctcaagttagattcctggttctggacgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacctcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactgcattcttttgatgtgaaaaaactatccgaa
aaaatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatccaaaagcagataaactctgggaaaggctcggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacaagacctggcgctaac
actccagaaatgtggtctgaagctattaaaattcttaaaggagaatacactgttcgggca
atcaaagagcacaagatggaccaagccattattttctgcaggactaaaatagactgtgat
aatatggagcagtacttcatccaacagggcggaggtcctgataggaaggggcatcaattc
tcatgtgtctgcctgcatggtgatagaaaacctcaggaaagaaagcaaaatctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcacggcgttccatatgttatcaacgtgacactccctgatgaaaaacagaactatgtt
catcgaatcgggagagttggcagagctgagaggatgggtttggcaatctcccttgtggca
aaggagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaaggatgctataac
acccgactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttgaactgcactattgcccaagttgaaccagatataaaagtacca
gtggatgattttgatgggaaagttacatatgggcagaaaagagctttgggtggtggactc
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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