Pseudopodoces humilis (Tibetan ground-tit): 102102450
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Entry
102102450 CDS
T02921
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102102450 (DDX3X)
03041 Spliceosome [BR:
phi03041
]
102102450 (DDX3X)
03036 Chromosome and associated proteins [BR:
phi03036
]
102102450 (DDX3X)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102102450 (DDX3X)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102102450 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102102450 (DDX3X)
Spliceosome [BR:
phi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102102450 (DDX3X)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102102450 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102102450
NCBI-ProteinID:
XP_005526551
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSTSKGRYIPPHLRNREASKQGFDSGGWSS
RRDKDAYSSFGARSDRDAKSSFFDRGTGSRGGRYEERGRGGDYDRSGFGRFDRGGNSRWC
DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMG
EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG
DALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ
QIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD
TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPDKR
SFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR
SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER
NINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSG
FGSSSSSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactctcagagtgaaggaagctctacaagcaaaggccgatacattcct
cctcatttgcggaacagggaagcttcaaaacagggtttcgatagcggtggttggagctcc
agacgagacaaggatgcctacagcagcttcggtgcacgctcggaccgcgacgccaaatcc
agcttcttcgaccgtggaactggatccagaggagggagatatgaagagcgtggcagagga
ggggactatgaccggagtggcttcggcagatttgaccgtggtgggaacagccgctggtgt
gacaaatcggatgaggacgactggtcaaagcctctccccccaagtgaacgtctggaacag
gaactcttttcaggaagcaatactggcattaactttgagaaatatgatgatattcctgtt
gaagcaacaggcagcaactgtcctccacatattgaaagtttcagtgatgttgacatggga
gaaattataatgggaaacattgaactcacacgctacacccgtcctactccagtccagaaa
catgcaatacctattattaaagaaaagagagacttaatggcctgtgctcagacagggtct
gggaaaacagctgcatttcttctaccaatactgagccagatctatgcagatggccctggt
gatgccttgagagcaatgaaggagaatgggaggtatgggcgccgtaagcaatatccaatc
tcactggtcttggctcccactagagaattggctgtgcagatctatgaggaagccagaaag
ttcgcataccgctccagagttcgcccctgcgttgtgtatggtggtgcagacattggccag
cagatccgtgacttagaacgtggatgtcacttgcttgtagcaactccaggacgactggtt
gatatgatggagaggggaaagattggactggatttctgcaagtacctagtccttgatgaa
gctgacagaatgcttgatatggggtttgaacctcaaattcgccgaattgttgaacaagat
actatgccgccaaagggggttcgtcacaccatgatgttcagtgctactttccccaaggaa
atccagatgcttgctcgtgacttccttgatgaatacatctttctggctgttggcagagta
ggttctacatctgagaacatcacacagaaagtagtatgggtggaagagccagacaaacga
tcgttcctgcttgatctgctaaatgccacaggcaaagattccttgactttggtgtttgtg
gaaactaaaaagggggcagatgctcttgaggacttcctgtaccacgaaggctatgcctgt
acgagtatccacggagatcgctcccagagggacagagaggaagcgctgcatcaattccgc
tctggcaagagccccattcttgttgccacagcagtagcagcaagaggactggatatctca
aatgtaaagcatgtcataaactttgatttgccaagtgacattgaggagtacgtacatcgt
attggtcgtacaggccgtgtagggaaccttggtcttgccacttcattcttcaatgagagg
aacataaatattacaaaggacttgcttgatctccttgtggaggctaagcaagaagtacct
tcttggctggagaacatggcctatgaacagcatcacaaaggaggaggcagccgtgggcga
tctaagagcagtcggttcagcggaggctttggagccagggactaccggacgagcagcggc
ttcggcagcagcagctccagcagcagccggtcaaccagcagccgcagcggcgggagcggc
agcagaggctttggaggtggtggttatggaggcttctacaacagtgatggatatggagga
aactataactcccagggggtggactggtggggcaactga
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