KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102102561
Entry
102102561         CDS       T02921                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X2
  KO
K13133  gem associated protein 5
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phi03019]
    102102561 (GEMIN5)
   03041 Spliceosome [BR:phi03041]
    102102561 (GEMIN5)
Messenger RNA biogenesis [BR:phi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102102561 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     102102561 (GEMIN5)
Spliceosome [BR:phi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    102102561 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd WD40_Gbeta WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_RFWD3 MIOS_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR41 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT122_1st TPR_IF140-IFT172 WD_LRWD1 Beta-prop_IP5PC_F Tricorn_2nd Lgl_C
Other DBs
NCBI-GeneID: 102102561
NCBI-ProteinID: XP_005523668
LinkDB
Position
Unknown
AA seq 1536 aa
MAAETGPGMGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAAVAPAFYGELI
GHTDRISGFAFCHCPGQGSLCASSSDDGSVKIWDSGTLSPVLEYSLHQNAISALHWSPLV
KDLIVSGDEKGVIVCYWHNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVIIDI
SRKREVVHRLRGHEDEIHCLAWCPVPGEERLPAWQDELQAPSEEGKVPNGELIQDTATKK
GCYLASGSKDQTIRIWSCTRGRSVMTLRLPPTKRRGGAVDPAVKERIWLTVHWPAARPTE
IVSSGFGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDRELLFSISMDRD
VKCWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGYLAIGVGDSMIRVWNTLSMNNIYDVKT
FWQSIKSKVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTL
AWGPATPPLIAGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKL
PARTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHDHGSQPEL
SYLIASGSINATIYVHNLKNVVENSSENPLMITEPFRTLAGHTAKITSLSWSPHHEGRLV
SACYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQE
HTRPPQGKKSIELEKKRSIQPKVKAKKKKKPVGKSPGKQDANDAMNGDDSMKEMLLEENG
VSDHEEEKEVQEAELADKVSVTVSRDTSSSACDYSSFSLPKPFVTQKAAPVKKDPPKDKP
TLDASLKKRKPRSILPFSTLMDHRTKEELYQDCLRLAACLKTKDNNEDVSPDLKDCIHLG
LFTDRDSLHKMIDMEGKHHLENGHAELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSP
MVGYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNYYREAIVMAKAR
LRPEDPVLKDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKTAAEL
ALVSGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNEVLCRCLSER
NPCERKSPVPPCYHSWELNREASFFDMVTEVWQNVLGMDTTEQATCAQEQLRRIEHPPST
SNTHPKQVLFHISHELALAALSCHLGMWDEAVKSILGAVTRSFDAGNFTLMQEICTIILP
KGCDDLRDKLDSTDSQSMDACRSLEGFVAYRLLYDLWWNPHRDSLGLQKAVLDPVLCPSE
QTALEESCISGDTSPEETVQSAAEMGENLCSTTEVPKCETQNDSRIDSVDLVDRQSKLKG
CQVLLSEEMAALQNTQRDIAEVQETLAEMIRQHQQQRNNLQENTNGNTQGSNLEQSSQTE
LDKPCSDSNQMNCNDEAKQPVTLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLL
HLGSQCPPELQEEALALLRKQGSAGVYKKAGRSFLT
NT seq 4611 nt   +upstreamnt  +downstreamnt
atggcggcggagacgggcccggggatgggggtgcgggcgctgcccgcctcccccaactgg
tacagcagccgctgcagcgacgccagcagcgacggccgcctcttcggcttcgcggcgaga
caccgtgtctgcctgctggatgtggccgccgtcgcgcccgcgttttacggggagctgatc
gggcacacggacaggatctcggggttcgccttttgccactgccccgggcagggcagcctc
tgcgccagcagctcggacgatggaagcgtcaaaatctgggacagcgggactctgtcgccg
gtgctggagtacagcctgcaccagaacgcgatctcggcgctgcactggtcacctcttgtg
aaagatctgattgtgtctggtgatgagaaaggtgtcattgtttgttactggcacaacaga
agtgacagccagcagttcttcccagagccccgaacggttttctgcctcacctgttctcct
catcatgaaaatctggtggccattggctacaaggatggcatggtggtgataattgatatc
agcaggaagagagaagtcgtgcaccggctgagaggccatgaggatgaaatccattgtctg
gcctggtgccctgtgcctggggaagaaaggttacctgcttggcaggatgagctccaggct
ccttcagaggaaggcaaggttccaaatggggagctgatacaggacacagccacgaagaaa
ggttgttacctggcctctggaagcaaggatcaaactatacgaatatggagctgtaccaga
ggcagaagtgtgatgactctgaggctgccacccaccaagagaagaggtggagctgtggat
ccggcggtcaaggagcgcatctggctgactgtgcactggcctgctgcccggcccacagag
attgtgtccagtggctttggaggagaactgctcctttggaatttgacccagcctgggaaa
cgcaagtggactcttctgggatcttcagaaggacaaaaccactcccgaattgtgttcaat
ctcagttctgtgaagcaccaagacagagaactccttttttccatttcaatggacagagat
gtgaaatgctgggatctgtcaactctggattgcagctggaccatgccctcccttggagga
tttgtctacagccttgccttctcccctgtggacactggctaccttgccatcggggttggg
gacagcatgatccgagtgtggaatactttgtccatgaacaacatttatgatgttaaaacc
ttctggcaaagtataaagtccaaggttacagcattatcctggcatccaaccaaggaagga
tccttggcttttggaacagatgatggaaaagttggcatatttgacaccttgtccagcagt
gctaagaataagccacctcagatctccagcacttaccacaagaagacagtgtacacatta
gcctggggtcctgcaactcctcctctgattgctggagaagaaagtgaacagccctctgta
actttatatagttgtgctggagaaggaattgttttccagcacaatccctggaagcttaat
ggagaagcaaatgacatcaacaaagtcatcagagacaccaattcaatcaaacacaagctg
cctgcacgtacagagatcagctggaaaccagatggcaaactcctggctcttggcaatgag
gatggctcaattgaaatatttcaggcaccaaacttgaagctgctctgcaccatccagcag
catcacaagctgatcaatgccattcgttggcaccatgatcatggcagccagccagagctg
agttacttgatagcttcaggctccatcaatgccaccatttatgtgcataatctgaagaat
gttgtagagaactcttcagaaaatcctttgatgataacagagccttttcgaactctggct
gggcacacagctaaaatcaccagtctttcttggagcccccaccacgagggaagattggtg
tctgcttgctatgatggcactgcacaggtgtgggatgtgatgaaggaagagccactctgc
aactaccgagggcaccagggccgcctgctgagtgtccagtggtcaccggtggattcagat
tgtgtttatacaggagcagatgatttttctgttcacaaatggcacatctccaagcaggag
cacacacggcctcctcagggcaaaaagagtatagaattagagaagaaaagaagtatacag
ccaaaagtcaaagccaagaagaagaaaaagcctgtaggcaagagtccaggcaagcaggat
gcaaatgatgccatgaacggagatgacagcatgaaggaaatgctgctggaggaaaatgga
gtgtcagaccacgaagaagaaaaagaagttcaggaggcagagttggcagataaagtctct
gtgactgtgtccagggatacatcttcatctgcgtgtgattattcttcgttcagcttgcca
aagccttttgtgacccagaaagctgctcctgtgaaaaaggatcctcctaaagataaacca
actcttgatgcctctctgaagaagaggaagcctcgttctattctgcccttcagcacatta
atggatcacagaacaaaagaggaattatatcaggactgcttgaggctggctgcatgtctg
aaaactaaagataataatgaagatgtgtcccctgacctcaaggattgcatccacctgggg
ctgttcacagacagggattctctgcacaaaatgattgatatggaaggaaagcaccacttg
gagaatgggcacgcagagctcttccagcagctcatgctgtggaaaggagacatgaagggt
gtcctccaggcagctgctgagaggggggagctgacagaccagcttgtagccatgtcaccc
atggttgggtaccaggcctgggtttggacagtggaagcctttgccaagcagctgtgtttt
caggagcaatatgtgaaggctgcctcccatctcctgtccatccacaaagtctatgaggct
attgagctcctgaaagtgaacaattattacagggaagcaattgtaatggctaaggccagg
ctacgtccagaagatccagttctgaaggatctctacaccagctgggcagctctgctggag
aaggatggtcattattccatggctgccaaatgttatttgggagcttcctcaccctatgat
gcggttaaagtgttgtcaaaaaagggggatgtgacatctcttaaaactgctgctgagctt
gctctggtatctggggaggaggagttgtcagcaactttgtctttgagatgtgcccaagac
ctgctgttatccaggaactgggtgggagctcaggaagtccttcagcagcataaaacttta
tttggacaaaggcttgttttctgcctgaatgaagtgctctgcaggtgcctcagtgaaagg
aacccctgtgagcgaaagagccctgtgcccccctgttaccacagctgggagctgaacaga
gaggcctcattttttgacatggtgacagaagtgtggcagaacgtgctgggcatggacacc
actgaacaagccacatgtgcacaggagcagcttcgcaggattgagcatcctccttcaacc
agcaacacacacccaaagcaggtgcttttccacatctcccatgagctggcccttgcagcc
ctgagctgtcacttgggtatgtgggatgaggcagtgaaaagtattcttggggctgtgacc
cgcagttttgatgctgggaatttcactctgatgcaggagatttgcactatcatccttcca
aagggctgtgatgacctgagagacaaactggacagcacagactctcagagcatggatgcc
tgcaggagtctggagggctttgtagcttacagactgctctatgacctgtggtggaaccca
cacagagactcccttggcctgcagaaggctgtgttggatcctgtgctgtgtcccagtgag
cagacagctcttgaggagagctgtatttcaggtgacacatcccctgaggaaacggttcaa
agtgcagctgagatgggtgaaaatctctgcagtacaactgaagtccctaagtgtgagaca
cagaacgactcaagaattgactctgttgatttggtagacagacagtcaaaactgaagggt
tgccaagtactcctttcagaagagatggctgccttgcagaacacccagagggacatagct
gaggtccaggagactttagcagaaatgattcgccagcatcagcagcagaggaacaatctc
caggaaaacacaaatggaaacacccagggaagcaacttggaacagagttcacagactgaa
ttagacaaaccatgctctgacagcaaccagatgaattgcaacgatgaagcaaagcaaccg
gttacactccctgagctcacaaagcagcttctgaaagcgaagcagaaactagctgaattc
ccagacaatttaaaggtcttcccgttccctgacgtgctggagtgctgcctcgtgctcctt
caccttggatcccagtgtcctcctgagctgcaggaagaggctctggctctccttaggaaa
cagggtagtgctggtgtttacaaaaaggctggcaggagcttcctgacatga

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