Pseudopodoces humilis (Tibetan ground-tit): 102102702
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Entry
102102702 CDS
T02921
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03420
Nucleotide excision repair
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102102702 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
102102702 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102102702 (DDB1)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102102702 (DDB1)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
102102702 (DDB1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102102702 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102102702 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102102702
NCBI-ProteinID:
XP_005529022
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactacgtggtgacggcgcagaagccgacggccgtcaatggctgcgtcacc
ggacacttcacctctgcggaggacctgaacctgctgattgccaagaacacccggctggag
atttacgtggtgacagccgaggggctgcggcccgtcaaggaagtgggaatgtatggaaaa
accgccgtcatggagctcttccgccccaagggggagagcaaggatttgctgttcatcctg
acggccaagtacaatgcctgcatcctggaatacaagcagaacggggatagcattgacatc
atcacccgtgcccatggaaatgtgcaggatcgcattggccgcccctcggagacggggatc
atcgggatcattgaccccgagtgccggatgatcgggctgcggctctacgatggcctcttc
aaggtcatccccctggatcgggagaacaaggaattaaaggccttcaacatccgcctggaa
gagctccaggtcatcgacgtgaaattcctttatggctgccaagctcccaccatctgcttc
gtctaccaggatccccagggccgccatgtgaagacatacgaggtgtccctgcgggagaag
gaattcaacaaaggcccttggaagcaggaaaatgtggaggccgaagcctccatggtcatc
gcagtgccagagccctttggaggcgccattatcatcggacaggaatccatcacctaccac
aatggggataaatatctggctatcgctcctcccatcatcaagcaaagcaccatcgtatgc
cacaaccgtgtggatcccaacggatcgcggtatttgctgggagacatggaagggcggctc
ttcatgctgctcctggagaaggaagagcagatggatggcactgtcaccttgaaggatctg
cgtgtggagctgctgggagagacatccattgctgagtgcctgacctacctggataatgga
gtggtgtttgttggctccaggcttggagattcccagctcgtgaagctcaatgtggacagc
aacgagcagggatcctacgtggtggccatggagaccttcaccaacctcgggcccattgtg
gacatgtgcgtggtggacctggagagacaaggccaaggccagctggtcacctgctccggg
gctttcaaagagggatcattgcggatcatccggaacggcatcgggatccatgagcacgcc
agcatcgacctgccgggaattaaaggactgtggccactgaggtcggatccgcaccgggag
acggacaacaccttggtgctgtcctttgttggccagaccagggttctgatgttgaacgga
gaggaagtggaagagacggagctcacaggatttgtggatgaccagcagacgttcttctgt
ggcaatgtggcacatcagcagctgatccagatcacctctgcctcggtgcgactggtcagc
caggagcccaaatccctggtgagcgagtggaaagagcccaatgggaagaacatcagcgtc
gcttcctgcaacagcaatcaggtggtggtggccgtgggaagagccttgtactacctggaa
atccggccccaggagctccggcagatcagctgcacagagatggagcacgaggtggcctgc
ctggacatcacccccctgggggattccaacgggatgtccccgctctgcgccattgggctc
tggactgacatctctgcccgcatcctgaagctcccatccttcgagctgctgcacaaggag
atgctgggaggagagattatccctcgctccatcctgatgacgaccttcgagagcagccac
tacctcctgtgtgccctgggggacggagctctcttctactttggcctcagcctcgagaca
ggcttgctgagtgacaggaagaaggtgaccctgggcacgcagcccacagtgctgaggaca
ttccgctccttgtccaccaccaatgtgtttgcctgctccgaccgccccaccgtcatctac
agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc
cccctcaattccgatggatatcccgacagtttggccttggccaacaacagcacactgacc
atcggcaccattgatgagatccagaagctgcacatccgcactgttcccctctatgagtcg
cccaggaaaatctgctaccaagaggtatcccagtgtttcggggtgctctccagccggatc
gaggtgcaggatgccagtgggggcaccacggcactcagacccagcgccagcacccaggcc
ttgtccagcagcgtgagcaccagcaagctgttttccagcagcacagctccgcacgagaca
tccttcggagaggaggtggaagtgcataacctgctcatcatagaccagcacacctttgaa
gtgctccatgctcaccagttcctgcaaaatgagtatgccctcagcctggtctcctgcaag
ctgggaaaggatcccaacacctacttcattgtgggcactgccatggtgtatcccgaggaa
gcggaacccaagcaaggccggatcgtcgtcttccactactccgatgggaagctgcagagc
ctggctgagaaggaggtcaagggagccgtgtattccatggtggaattcaacgggaagctg
ttagccagcatcaacagcacggtccgcctgtacgagtggacagcggagaaggaattgcgc
acggaatgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc
atcctggtgggagacctcatgcgctctgtgctgctcctggcctacaaacccatggaaggg
aatttcgaggagattgcccgggatttcaatccaaactggatgagtgccgtggaaatcctg
gatgatgataatttcttgggagcggagaacgctttcaatctgtttgtgtgccagaaggac
agtgcggccacgacagatgaggagaggcaacacctgcaggaagtgggattatcccacctc
ggagagttcgtcaatgtcttctgccacggatccctggtcatgcagaacttgggagagact
tccacacccacccagggatccgtgctcttcggcactgtcaatggcatgatcggcctggtg
acatccctgtcggaaagctggtacaacctgctcctggacatgcagaacaggctcaacaaa
gtcatcaagagtgtggggaagattgagcattccttctggagatcattccacaccgaacgg
aagacagaaccggccacaggattcattgatggagacctgatcgagagtttcctggacatc
agcaggcccaagatgcaggaagtggtggcaaacctgcagattgacgatggaagcgggatg
aagagggaagccaccgtggacgacctcataaagatcgtagaggagctgacccggatccat
tag
DBGET
integrated database retrieval system
