Pseudopodoces humilis (Tibetan ground-tit): 102102883
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Entry
102102883 CDS
T02921
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04020
Calcium signaling pathway
phi04080
Neuroactive ligand-receptor interaction
phi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102102883 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102102883 (GRIN2C)
04082 Neuroactive ligand signaling
102102883 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phi04040
]
102102883 (GRIN2C)
Ion channels [BR:
phi04040
]
Ligand-gated channels
Glutamate (ionotropic)
102102883 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
102102883
NCBI-ProteinID:
XP_014111212
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MGRAPAHTLLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSSQSFLD
MPLEIHPITVVVNNTNPSTLLTQICDILAGHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQMQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYVWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPTRTINTNTSFYRHLLNVTWEHRDFSFNEGGYLIRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSHSGNGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPSF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRVPTPDVTASSAQANVLKML
QAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPPPGP
AERLGRTYAPKGAPLGLPLPQPIPVDSRLHGEENWREANEHPHLLHPLKFRGDCVGDEAL
TGFPHLLVKTAPGGDYREQMLVGNHVGAPLPPPTTPRDLPPPDIYREHKRPSGRGDRLPN
SPLLQRDGAHRGSGTLPRLLSAAEKKREAGSAFLPPSCSRGAFPKVSRTCRARGEPARPE
AAVMEREKLSRWASSARAPGERGEKRRPAGLRRCGATRPPARTDVPDLFPESYGCGSRCP
QATGRLPPRSPVTRLPSYREACRQNPRATATVPACAPHACMNSYANLPLYARHLVRGSPA
PREPSGLHPCERGSGRWDSGCRDCGRRGELALLRAVGADRREPLVARGVASPCAGGSWRR
VSSLESEV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcacacactctgctactgtcgatggtgctgggctgctcggctgcc
ttcacagacatcctgctgccaggccctgaggagccagtggtcaacgtggccgtggtgttt
gggggcacatcctaccccctgcacatccgctcccgcctgagctcccagagcttcctggac
atgcccctggagatccaccccatcactgtagtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctcgccggccacaagatccacggcattgtctttgaagac
aacgtgggcacggaggctgtggcccagatccttgacttcatctcgtcccagacccaggtc
cccatcatcagcatcagtggcgggtctgcagtggtcctgaccccaaaggagcccggatca
gctttcctgcagttgggtgtctccattgagcaacaaatgcaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctacccaggctacaacatt
ttcctggatgtcatccgctccttcacggatgccagctacttcggctgggagctgcaggag
gtgctcaccttcgagatgagccaggagcagagcagctccaggacgcagcggctcctgcgc
cagattgatgcccaggtcctcattgtttactgctcccgagaggaggctgagtatctcttc
tccatggcggaacaagctgggcttgtggggccaggatacgtctggattgtgcccagcatg
acagtgggcaacatggaggtgccaccctcctccttcccggtcggcctcatcagtgtggtg
acagagagctggaaactgagcctgcggcaaaaggtgcgagacggcgtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtagggcgggactgc
tggacccccaccagaaccatcaacaccaacacaagcttctaccggcacctcctcaatgtg
acgtgggagcaccgggacttctccttcaatgaaggtggctacctgatcaggcccaccatg
gtggtgatcacgctcaaccagcaccgtctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaagtacccggtgtggccccgctacggctccttcatgcagcccgtggtc
gacaaccgccacttgacagtggccaccctggaggagagaccctttgtgattgtggagaac
acagaccccagcacgggggtctgtgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcctcccacagtggtaatggccttgtggatccctacaccaagctgtgctgcaaaggtttc
tgcattgacatcctgaagaagctggccaaggcggtgaagttctcctacgacctctacctg
gtgaccaatggcaaacacggcaagatcgtccgtggggtctggaacggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaatgaggagcggtcc
gagattgtggatttctctgtgccctttgtggagacaggcatcagcgtcatggtggcccgg
agcaatggcaccgtgtccccctccgctttcctggagccttatagcccagctgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcactgtcttcgtgtttgagtatttc
agccctgttggctacaaccagaacctcaccagcggcaagaggccaggaggtccctccttc
accattggcaagtctgtgtggctgctgtgggctctggtcttcaacaactcagtccccatt
gagaaccccaagggcaccactagcaagatcatggtgctcatctgggccttctttgctgtc
atcttcctcgccagctacacggccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccacaggagcagtacccacct
ttccgctttggcactgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggatgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgatgcagcagtgctcaactacatggca
ggcaaggacgagggctgcaagctggtgaccatcggcagcgggaaggtgtttgccaccaca
ggctacggcatcgccctgcagaaggactcgcgctggaagcgggccatcgacctggccctg
ctccagttcctgggagacggtgagacccagaagctggagacggtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacattgacaacatggctggg
gttttctacatgctgctggtggccatggggctgagcctgctggtctttgcttgggagcac
cttgtctactggaagctgcgtcactccgtccccaagtcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcaatggggtgcagaccctgtcgagccctggg
cgggtgcccacacccgacgtcactgccagctcagcccaggccaatgtgctgaaaatgctg
caggcagccaaagagatggtgacaacagccagtgtaggtggctcattggagcaggccacc
cgcaccattgaggactggagcaaccacagcgagcgcctccagaccaccttctccctgagg
acaccccaactcgtggtgcagaacagcaccggcgcacaccgggggccgccccctggcccc
gccgagaggctggggagaacctacgctcccaagggtgctcccctggggctgccgctgccc
cagcccatccccgtggactcccgtctgcacggggaggagaactggagagaggcaaacgag
cacccccacctgctacaccccctgaagtttcggggtgactgtgtaggggatgaagccctc
acaggtttcccccacctcctggtgaagactgctccaggaggggattatagggagcagatg
ctggtggggaaccatgtcggggctcccctcccgccccctacaacccccagggacctccca
ccaccggacatctacagggagcacaagcggccgtcgggccggggggaccggctgccaaac
agccccctgctccagagggacggggctcaccggggctcagggactctgccccggctcctc
tctgcagcggagaagaagcgggaggcgggcagcgccttcctgcctccatcctgctctcgc
ggagccttcccgaaagtcagcaggacttgcagagccaggggcgagccggcgcggccggag
gcggcggtgatggagcgggagaagctgagccggtgggcgagctcggccagggctcccgga
gagcgcggcgagaagcggcgtccagcggggctgcggcgctgcggggccacccgcccgccc
gcccgcaccgacgtgcccgacctgttccccgagagctacggctgcggctcccgctgccca
caggccactggccggctgccaccgcgctcgcccgtcaccaggctgccgtcctaccgggag
gcttgccggcaaaacccccgtgccaccgccaccgtgccggcgtgcgctccccacgcctgc
atgaactcgtacgccaacctgcccctgtacgccagacacctcgtgcgggggtccccggct
cctcgggagccctccgggctgcacccctgtgagcggggatccggacgctgggacagcggc
tgcagggactgcgggaggcgaggggagctggccttgctgcgggcggtgggggcggacaga
agggagccgctggtggcccgcggggtggcgagtccctgcgccggcgggtcctggcggcgg
gtctccagcctggagtcggaggtgtga
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