Pseudopodoces humilis (Tibetan ground-tit): 102102955
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Entry
102102955 CDS
T02921
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102102955
03015 mRNA surveillance pathway
102102955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102102955
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102102955
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102102955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102102955
NCBI-ProteinID:
XP_005528321
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgctg
agcactttacacctgaaggacgaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaatgtggagaagacagaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggatcccacatcacccctctactctgtcaagtcttttgaggagctgcgcctgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatccaagag
aatgccctgcccatgatgcttgctgaacccccgcagaacctcatcgcgcagtcgcagtcc
ggtactggcaagacagctgccttcgtcctggccatgctcagcagggttgagcctgggaac
aagtatccacagtgtttgtgcctttccccaacatacgagctggcacttcagacaggaaaa
gtgattgaacagatgggaaacttctacccagagctgaaacttgcatacgctgtccgaggc
aacaaactggagagagggcagaagatctcagagcagatcgtaatcggcacgcctggcacc
gtgctggactggtgttccaaactgaaattcatagaccccaagaagatcaaggtgttcgtg
ttggatgaggcagatgtgatgatcgccacccagggccaccaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctcctgttttcagccactttcgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgtgag
gaggagaccctggacaccatcaagcagtattatgttctgtgcaacaacagagatgagaag
ttccgggctctgtgtaacatctacggtgccatcaccattgcccaggccatgatcttctgc
catactcggaagacggcggggtggctggcggcagagctgtccagggagggccatcaggtg
gccttgctcagcggggagatgatggtggagcagagagctgctgtgatcgagcgcttccga
gagggcaaggagaaggtgctggtgaccacaaatgtctgtgccagagggatcgatgtagag
caggtctctgttgttatcaattttgatctgcctgtggataaggatgggaatccagacaac
gagacctacctgcaccggatcggccgcaccggccgcttcggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataaataactga
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