Pseudopodoces humilis (Tibetan ground-tit): 102103111
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Entry
102103111 CDS
T02921
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102103111 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phi04990
]
102103111 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
phi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102103111 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
102103111
NCBI-ProteinID:
XP_014117042
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All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKAEPAEVVKPVPIASAVAPKVTAT
TSVAFNKTPRPFGAVTSSKVTSIPSPSSAFTPAQASAASPCAVAGAHANAKPNAEPWPPV
PGAPKPAVPVPRQHGAAPSASAADGAQDAAEGPRRGGRENQGESKQQNGPPRKHIVDTYT
EFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPENDAGKKTND
SLEAAQPAPVRSIPACQDNVDVRPAPANTTPATVLKPTAPLGSAKGWQPPNQAAPVSGWA
SNSIKSPGKTAPSEKPATTPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALG
KSWHPEEFNCAHCKTSMAYIGFVEEKGMLYCEVCYEKFFAPECSKCQRKILGEVINALKQ
TWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALG
HTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccagctccctggggattcaggcttcaagga
ggcaaggatttcaatgtgcctctgtctatctctcgacttaatgatggtggcaaagcagcc
caagcacatgtggggattggtgacgtggttctcaccattgatgggataagcacagatggg
atgactcatctagaagcacaaaacaagatcaaggcgtgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgatcattttcatgtgacaaaggcagaacct
gccgaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccaca
acgagcgtggctttcaataagacaccgaggccatttggagctgtaacctcctccaaggtc
acctccatcccatcaccgtcctccgccttcacgccggcgcaggcgtcagccgcatccccg
tgtgccgtggccggagcgcatgctaacgccaagcctaacgctgagccgtggccgcctgtg
ccgggcgctcctaaacctgcagttcctgtcccacggcagcacggtgccgccccgagcgcc
tcggccgccgacggcgcccaggacgcagccgaggggccgcgacgaggaggcagagagaac
cagggggagagtaaacagcaaaatggccccccgcggaagcacatcgtggacacctacacg
gagttctaccacacgcccacccacagcgacgccagcaagaagcggctgattgaagacacc
gaggactggcacccccgcacaggcaccacccagtcccgctccttccgcatcctcgcccag
atcactggcactgatcacatgaaagaaccagaaaatgacgctgggaagaagactaatgat
tccctggaagctgcccagcccgccccggtgaggagcatccctgcctgccaggacaacgtg
gatgtgagacctgctcctgccaacaccacacctgctacagtcctcaagccaacggcaccc
ttgggttctgccaagggctggcagcctccaaaccaagcagctcctgtcagtggatgggca
tcaaacagtattaaatcacctggaaaaactgccccgagtgaaaaacctgcaacaacaccc
cagctaaatgagcaagacacgttggttcagcgagcggagcatattccagcggggaagcgc
actcccatgtgtgcacactgcaaccaggtcattagaggacccttcttggtggctttggga
aagtcatggcatccagaggagtttaattgtgcccactgcaaaacctccatggcatacatt
ggatttgtggaagagaaagggatgctgtattgtgaggtctgctatgagaagttctttgcc
cctgagtgttcaaagtgccagaggaagatccttggggaagtaataaatgctttgaaacaa
acttggcacgtttcctgcttcgtgtgtgtggcctgtcataaccccatccgcaataatgtc
tttcacttagaagatggtgatccctactgtgagacagattactacgccctctttggtacg
atgtgccacggctgtgaattccccattgaagctggagacaggtttcttgaagccctgggc
cacacttggcatgacacctgctttgtatgctctgtttgtagtgacagcttggagggccag
actttcttctccaagaaggacaagccactgtgcaagaaacacgcccactctatcaacatc
tga
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