Pseudopodoces humilis (Tibetan ground-tit): 102103243
Help
Entry
102103243 CDS
T02921
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
phi04148
Efferocytosis
phi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102103243 (VPS18)
04148 Efferocytosis
102103243 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102103243 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102103243 (VPS18)
Membrane trafficking [BR:
phi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102103243 (VPS18)
Hops complex
102103243 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
102103243
NCBI-ProteinID:
XP_005522534
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVQHSRASVGIPHSGYVSARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDEQVWVYPPDIDITVNKPISIVLTQFHFLLLLSDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGMLQGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLATTSQPSKSHHRPKDTDTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaggactccctgcaccgctccgtctccgtgcagcac
agccgcgccagcgtgggcatcccgcactccggatatgtcagtgcacgactggagaaggaa
acgccaatatttaacaagcagaggattgattttactcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaaaatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcgctctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagaaaccaacacagggcctatc
ctggtggggacatcccaggggcagatctatgaagctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaagtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggatagaagggaaattttttatt
atagccaccactaggaagagactcttccagtttgttggcaaagtgcctgaagggacagag
cagcagggcttcagctccatatttgctgtgcatgctgaccatctgcccagttttcgggag
tttccagccaacttgggcttcagcgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacactggattatagt
cgtcctgattcgattctgagtgatgaacaggtctgggtttatccgcctgatattgacata
actgtaaacaagccaatttccattgtacttacccagttccacttcctgttgctgctgtct
gaccgagtgaaggctgtctgcactctgaatggacaggttgtttttcaggatctgttcctg
gagaaatttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaggtagtcttccgctatcatgtccaacgggaatctagagacgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacatagtgttggccaaagaggcagagcactgcttccaaaacaagaggtatctg
gacagtgccaaatgttacgcactgacccagaactactttgaggaaattgctctgaagttc
atagaagccaagcaagaagaggccctgatggagtttctgattaagaagctgagtaaccta
aagccttcagagaagacacagaccactctgctgaccacgtggttgacagagctgtatctg
aactggctgggtatgttgcaaggagatccctcacagcgaaatctctatttggatacacgg
gagaagttccgcactttcctgagcagtcctaaaaacaaagactgtctttttaataaccgg
gcatcaatttatgagctgttggcgagccatggtgacacagagcacatggtctactttgca
gtcatcatgcaggattatgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctaaacgtgttgtccaggcacagagatgagaagctcttctacaagttctctccg
gttctcatccagcatatccccaagaaggtagttgacgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgtaaactacagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggactcgctgctg
tcatacctggagcaagcaggaaccaacccaaacagaatccactatgacctgaagtatgca
ctgcgcctgtgtgcagagcacgggcaccaccgtgcatgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatcttgccttacaggtagatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagatcgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gctctgctgaagattgaagatgtgctgccattctttccagattttgtaactattgatcat
ttcaaggaggcaatctgtaactccttggaggattacaacaagcacattgaggaactgaaa
agggagatggaggaagccacacaaagtgccaagaggatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgtcctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctg
caagcagttttcccaaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcaactaccagccagccatccaagagccaccatcgtcccaaggacacagacacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccgctccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
