Pseudopodoces humilis (Tibetan ground-tit): 102103257
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Entry
102103257 CDS
T02921
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102103257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102103257
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102103257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
102103257
NCBI-ProteinID:
XP_014111870
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASA
KLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQ
RRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPP
NRKLGGTIDVIGGQAGTIRRVEGRRRDKHATEENPIQVLGDHGSKPQPPQQPQQPSQPQQ
PPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLA
PPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSS
SHWEYSGSRRERERERERERERERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYR
RSRDRSREREERHRERRHRDKDDGSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEA
SEDGAQEGEEQDTKE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcacgcccttcccagtggtgaggatgatgaggatgacagtgacagcgacagc
gatgacgatgacgtgaaggtcacaattggcaacatcaagacgggagcgccgtcctacatg
ggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatcagcttcagcc
aagttgcagcccaaaggtattgacttggatgccgcagggaatattaatggattgcctgtg
atagaagtggatttggattcatttgaagacaaaccgtggaggaaaccaggtgctgatctt
tctgattactttaattatggattcaatgaagaaacatggaaagcttattgtgaaaagcag
cggcggcttcagctggggctggaccctgctcctcccatcagcactgagaacaagatcacg
gttcagcagggaagaacaggaaatgctgaaaaagaagtagaaaacaacatcatcaaaaca
gagttcaaaacagacttcttggctctggtgggaggacgaatgaaggctgggcctcctccc
aacaggaagctgggtgggaccattgatgtgatcgggggccaggcaggcacgatccgcagg
gtggaagggagacgtcgggataaacacgccacggaggaaaaccccattcaggtcctggga
gaccacggcagcaagccccagcccccccagcagccccagcagccctcgcagccccagcag
cctcctcagcagcagccgttcgctccaccagcagggcctccgcctcccccgctcgccggg
cctcctcctccgcatttcctgcaccctcctcctccagtgacttctgttccacctcccctg
catcctccaggcctgccacctccaggtccaattccagggttgttcccaccacctctggca
ccaccaccagccctcctcatcccaaccttggatgggcagccagccagctacaacaacagg
cagccacctccctttggctacaactctgcagattcaggtttcatcagctacccccccatc
tccacgtcccacacgccctgggtgaccacggtggacaagggcacgagcagctccagcagc
agccactgggaatactcgggctccaggcgcgagagggagcgtgagcgagagcgcgaacgg
gagagggagcgagaccgagaccgcgaccgcaccccgaccaccagtgaatacaacaatgat
gatgagcggtaccgctactacagccgcgagcgcagctacgacttcgagcgcgattaccgg
cgcagccgcgaccgcagccgcgagcgcgaggagcggcaccgcgagcgccgccaccgcgac
aaggacgacggcagcaaacacaaatcctcccgcaggaagcagcacgagagcgaggagggg
gagagccaccggcgccacaagcacaaaaagaacaagcggagcaaggaggagaaggaggcc
agcgaggacggagcccaggagggcgaggagcaggacaccaaggagtga
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integrated database retrieval system
