Pseudopodoces humilis (Tibetan ground-tit): 102103323
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Entry
102103323 CDS
T02921
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102103323 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phi01007
]
102103323 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phi03016
]
102103323 (FARSB)
Enzymes [BR:
phi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
102103323 (FARSB)
Amino acid related enzymes [BR:
phi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
102103323 (FARSB)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102103323 (FARSB)
Prokaryotic type
102103323 (FARSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
102103323
NCBI-ProteinID:
XP_005527083
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFRALGRSYTDEEFDELCFEFGLELDEITSEKDIISKEKGEEKAKGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERINLPRFEKIIPAEGEGQRLIITEQTAQIRP
HAVAAILRNITFTKDRYDSFIDLQEKLHQNICRKRALVAIGTHDLDTITGPFTFTAKAPS
EIKFKPLNQSQEYTASQIMDLYRTDSHLRHYLHLIENKPRYPVIYDSNGVVLSMPPIING
DHTKISLNTRNVFIECTGTDITKAKIVLDVIVTMFSEYCEKPYTVEAVEVVYPNGKTHVY
PELAYRTEKVKPEYINKKVGISETPSSLAKLLTRMCLKSHVTGNGNHLEIEIPPTRADVI
HACDIVEDAAIAYGYNNIQMVIPKTYTIANQLPLNKLTELLRLDLAAAGFTEALTFALCS
QEDIADKLGTDISATNAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
IVVKDPSTDVGARNYRRLCAIYYNKSPGFEIIHGLLDRVMQVLEVPPSEKNGYTIKAAEG
SAFFPGRCAEVFAKGQSIGKLGVIHPDVITKFELTMPCSVLEINIEPFV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcagcgtgaagcgggatctgctgttccgggcgctcggcaggagctacacg
gatgaagaatttgatgagctttgctttgaatttggtttggagcttgatgaaattacatct
gagaaggacattataagtaaggaaaaaggtgaagaaaaggcaaaaggtgcgtctgatgtc
gttctctataaaattgatgttcctgccaaccgctatgatctgctttgcctggaggggttg
gtccgaggactacaggtctttaaggaaaggataaatctccctaggtttgaaaagataata
ccagctgagggtgaaggtcagaggctgattatcactgaacagactgcccagatccggcct
cacgctgtagctgccatcctccgaaatataacttttaccaaggaccgttacgacagtttc
atcgacctccaagagaaactacaccaaaatatttgcaggaaaagggcattagtagcaata
ggtacccatgacttggacaccatcactggtccatttacttttacagccaaagcaccttct
gaaattaaatttaagcccctgaatcaatcccaggagtacacagcctcacaaattatggat
ctgtataggactgacagccaccttcggcactatttgcacctgattgaaaacaaaccacgt
tatcctgtcatttatgacagcaatggggttgttctgtccatgccacccatcatcaatgga
gatcatacaaaaataagcctaaataccagaaatgtgtttattgaatgtacaggcacagat
attacaaaggcaaaaattgttcttgatgttatagtcacgatgttcagtgaatattgtgag
aagccatacactgttgaagcagtagaagtggtttatcccaatgggaagacccacgtctat
ccggagctggcttatcggacagagaaagtgaaacctgaatacattaacaagaaagtagga
atcagtgaaactccatcaagcctggcaaagctgctgactaggatgtgtttgaagtcacac
gtcacagggaatgggaaccatctagagattgaaatccctcctaccagagcagacgttatc
catgcctgtgatatcgtagaagatgcagcaatagcttatggttataacaacattcagatg
gtgattccgaaaacgtacaccatagctaatcaacttcccctcaataagctcacagaactt
ctgagactggacttggcagctgctggattcactgaagcactcacttttgccctgtgttcc
caagaagatattgcagataaacttggcacagacatctctgcaacaaacgccgtgcacata
gcaaaccccaaaacagcagaatttcaggtggcacgtacaaccctccttcctgggctgctg
aaaactattgctgccaacagaaagatgcccttgcctctcaaactctttgagatttctgac
attgtagtaaaagatcctagtacagatgtaggggcgagaaactatagacgtttatgtgca
atttattacaacaaaagcccaggctttgagatcatccatggtttgctggacagggtcatg
caggtcctggaagtaccaccaagtgaaaagaatggctacaccatcaaggcagctgaaggc
tctgctttctttcctggtcgctgtgctgaggtctttgctaaaggtcaaagcattgggaaa
cttggagtcatacaccctgatgttatcaccaagtttgagctcaccatgccttgctctgtc
ctagagatcaatattgagcccttcgtgtga
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