KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102103754
Entry
102103754         CDS       T02921                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140  Autophagy - animal
phi04142  Lysosome biogenesis
phi04148  Efferocytosis
phi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:phi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    102103754 (VPS41)
   04140 Autophagy - animal
    102103754 (VPS41)
   04148 Efferocytosis
    102103754 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102103754 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phi04131]
    102103754 (VPS41)
Membrane trafficking [BR:phi04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    102103754 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin VPS18_solenoid_2nd zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_HPS5 Vps39_1 zf_RING_Vps8 Beta-prop_THOC3 ANAPC4_WD40 TPR_PEP5_VPS11 WD40_WDHD1_1st TPR_YpiA Frtz Beta-prop_WDR3_2nd zf-RING_5 Beta-prop_RIG_2nd Beta-prop_IFT122_1st TPR_INTS8 Beta-prop_IFT140_2nd RING_Ste5 CFAP251_N zf-RING_11 zf-RING_2
Other DBs
NCBI-GeneID: 102103754
NCBI-ProteinID: XP_005529992
LinkDB
Position
Unknown
AA seq 854 aa
MAEAGEKETRSNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSAEEFH
ETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGEGNIRNVKWR
GHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKI
CSVKERHASEMRDLPNRYVEIVFQFETEFYISGLAPICDQLVILSYVKEISEKTEVECCA
RPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEYDLAARKCQK
ILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHAFLESDYEGFATLI
KEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLTLRHKDVF
QLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELQDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDASKSFSVVVFHCRHMFHRECLPVSNTVSSVQFCNICSA
KHRGPGSAVLEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagccggggagaaggaaaccaggtctaatgaggaatcaacagatgaatctgag
gaagatgagagtgaagaagaacctaagctcaagtatgaacggctttctaatggagtgact
gaaattctccagaaggacgcagccagctgcatgacagtgcatgaaaagtttttggcactg
ggaacacattatggcaaagtttatttacttgatgtccaggggaacatcacacagaagttt
gatgttagcccagtaaagataaatcagatcagcctggatgaaagtggagaacacatgggt
gtttgctcagaagatgggaaggttcaagtgtttggattatattcagcagaagagtttcat
gaaacgtttgactgtcctattaaaattgttgctgttcatcctcatttcgtaagatcccac
ttcaagcaatttgtaacaggaggaaagaagttgctgttatatgaaagaggctggatgaat
agatggaagccttcggttttacatgaaggggaaggaaatatcagaaatgtaaaatggaga
gggcacttaattgcttgggctaataatatgggcgtgaagatacttgacatgatctccaag
caaagaattactaatgtgcctcgagatgacataagccttcgcccagatatgtatccctgc
agcctttgctggaaggataatttaacgctgattattggctggggaaattcagtaaagatt
tgctcagtaaaagaacgtcatgccagtgaaatgcgtgacctaccaaaccgctacgtggaa
atagttttccaatttgagaccgaattctacatcagtggacttgcacctatctgtgaccag
cttgttatactttcgtatgtgaaggagatctccgaaaaaacggaagtggagtgttgtgca
aggcctagactcgatattgtacaacccctacctgagtcctgtgaagagatctcttctgat
gctctaacagtacgaggatttcaggaaaatgaatgtcgtgattatcatttagaatattcg
gaaggtgaatcacttttttatatcatcagcccaagagatgtggttgtggctaaagagcgg
gaccaagatgatcacattgactggcttcttgaaaagaagaaatacgaagaagctttgatg
gcagctgagatcagtcagaaaaccataaaaaagcacaagattttggacattggcttagcc
tatataaatcacctggtggagaaaggagagtatgaccttgctgctcgaaagtgccaaaaa
atccttggcaaaaacacagaactctgggaatttgaagtttacaagtttaaagaaataggt
cagcttaaagcaattagtcgttacttgccaagacgagatccagttttgaaacctctgatc
tacgaaatggtcctgcatgcatttttggaaagtgactatgagggctttgcaaccctaata
aaagagtggcctggagatctgtacaacaacacaatcatagttcaagctgtagtggatcac
ctgaagaaagatccacagaacaggactctgctaagaacgcttgcagaactgtacacttat
gatcagcgctatggcagagccctagaaatctacctaactctgaggcacaaagatgtcttc
cagttgatccacaaacacaatctcttcagttctatcagagacaaaattgttctgctcatg
gattttgattcagagaaagcggtagacatgcttttggataatgaagataaaatttccatt
gacagagttgttgaagaattagaaaacaggcctgagttacagcatgtgtatttacacaag
cttttcaaaagagaccaccataaaggccagcgatatcatgagaaacagatcagcctttat
gctgaatatgatcgaccaaacttacttccatttctcagagacagcacacactgcccactg
gagaaggctcttgaaatctgccagcagaggaactttgtagaagagacagtctatcttctg
agcagaatgggtaatagccgcagtgccttgaagatgataatggaagaattgcaagatgta
gataaagctattgaatttgccaaggaacaagatgatggagaactttgggaagatctcatt
ctatattctattgacaaaccaccttttattactggtttgttgaacaatattggaactcat
gttgatcctattcttttgatccaccgcattaaggaaggcatggagattcctaatttgaga
gactcactagtgaaaattcttcaagactacaacttgcagatcttgctgcgggaaggttgc
aaaaagatactcgttgccgattctctttctttattgaagaaaatgcatcgaactcagatg
aagggtgttctagtggatgaggagaatatctgtgaatcatgtctgtctccaatacttcct
tcagatgcgtccaagtccttcagtgtggtagtgttccattgcagacacatgtttcacaga
gagtgcctacccgtatctaatacagtatcttctgtccagttctgcaatatatgcagtgcc
aaacaccggggaccaggaagtgcagtcctggagatgaagaaatag

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