Pseudopodoces humilis (Tibetan ground-tit): 102103974
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Entry
102103974 CDS
T02921
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102103974 (SOX6)
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102103974 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102103974
NCBI-ProteinID:
XP_014107482
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSSKQATSPFACAADGEETMTQDLASRDKEEGNSDQHAASHLPLHNVMHNKPHSEELPTL
VTTIQQDPEWDGVISAQHRMESESNKLCSLYSFRNTSTSPNKPDEGGRDRSELMTSVNFG
TPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMEKLNTSDLLGEIK
GTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIA
RQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY
KPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTTGAL
SPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKTAEPVKSPTSPTQNLFPASKSSPVTVS
NKSGIPSPLSGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQ
PHGVDGKLPSMNNMGLNNCRNEKERTRFENLGPQLTGKPNEDGKIGPGVIDLTRPEDAEG
SKAVNGSAAKLQQYYCWPTGGATVAEARVYRDSRGRASSEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTC
IVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQM
TSDCSSTSASPEPSIPVIQSTYGMKTDSGSLPGNEMINGEDEIEMYEDYEDDPKSDYSSE
NEAHEAVSAN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaggctacctctccatttgcatgtgcagctgatggagaggaaacaatg
acccaggacttagcatcacgagacaaggaagagggaaacagtgatcagcatgcggcctct
catctgcctctacacaatgtaatgcacaacaaacctcactctgaggagctaccgactctg
gtcaccaccatccaacaggatcccgagtgggatggagtaatctcagcccaacacagaatg
gagtcagagagtaataagttatgttccctatattccttccgaaatacctctacctcacca
aacaagcccgacgaaggaggtcgtgaccgcagcgagctaatgaccagtgttaattttgga
acaccagagcgccgcaagggaagcctagcagatgtggtggacacactgaaacagaagaaa
ctagaagaaatgaccaggactgagcaagaagattcatcctgtatggaaaagctactttct
aaagactggaaagagaagatggaaaaattaaacacaagtgatctccttggagaaattaaa
ggtacaccagaaagcctggcagaaaaagagcgacagctctctactatgatcacccagctg
atcagcttacgggagcagctcctggctgcccatgatgagcagaaaaagctggcagcctca
caaatcgaaaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgca
agacaacagcagcaacttctgcagcagcagcacaaaatcaatctactgcagcagcaaatt
cagcaggttcagggtcacatgcctccgctcatgatcccaatttttccacacgaccagcgg
acactggcagcggctgctgcagcccagcagggattcctcttccccccaggaataacttac
aagccaggtgataactaccctgtgcagttcattccatcaacaatggcagctgctgctgct
tctggactcagccctttacagctccagcaactgtatgcagctcagctggcaagcatgcaa
gtttctcctggagccaaaatgccatctactccacaaccaccaaatacaacaggggcactt
tcacccactgggatgaaaaatgagaagagagggaccagcccggtaactcaagttaaggat
gaagcagctcagccactgaatctctcagcccgacccaaaacagctgaacctgtcaaatcc
ccaacatctccaacacagaatctcttcccagccagcaaaagcagtccagtgacagtgtcg
aacaagagtggcatccccagcccgctcagtgggtctctgggaagaggatcctctttagat
atcctttccagtcttaattcacctgccctatttggggaccaggacacagttatgaaagcc
attcaggaggctcgaaaaatgagagagcaaatccaaagggaacagcagcagcaacagcag
cctcatggtgttgatggaaaattaccctccatgaataacatgggtctaaacaactgcagg
aatgaaaaggaaagaacaaggtttgaaaatttaggcccacagttaacagggaaacccaat
gaagatggaaaaattggccctggtgtcatcgatcttacaaggccagaagatgcagaaggg
agtaaagcagtgaatggctctgccgctaaactacagcagtattattgttggccaacagga
ggggccacggtggctgaagcccgggtctaccgggactcacggggccgtgccagcagtgag
ccccacatcaagcggccgatgaacgccttcatggtctgggccaaggatgagcgtcggaaa
atcctccaggccttccccgacatgcacaactccaacatcagcaaaatcctaggatctcgc
tggaagtccatgtcaaatcaagagaaacaaccttattatgaagagcaggcacgactaagt
aaaatccatctagaaaagtatcctaattacaaatacaagcctcgaccaaaacgtacctgc
attgtggatgggaagaaactgcgtattggtgaatataagcaactgatgaggtctcgaaga
caggagatgaggcagttttttaccgtaggacaacagcctcagattccaatcaccacggga
acaggagttgtctaccctggtgctattaccatggcaaccaccacgccatcccctcagatg
acatcagattgctccagcacctctgccagccctgagcccagcatccctgtcatccagagc
acttatggtatgaagacagacagcggaagccttcctggaaatgaaatgataaacggagag
gatgaaatagaaatgtacgaggactatgaggatgatcccaaatcagactatagtagtgaa
aacgaagcccatgaggcagtcagtgccaactga
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