KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102104087
Entry
102104087         CDS       T02921                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phi03036]
    102104087 (KDM4A)
Enzymes [BR:phi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102104087 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102104087 (KDM4A)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102104087 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 102104087
NCBI-ProteinID: XP_005521123
LinkDB
Position
Unknown
AA seq 1055 aa
MASELESLNPGQRIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDVVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKNGKHCAEEMETEEACKEEVDGDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADMAEPCERPTNEFVQQGEQRLKLPDGVESAKFEELKTVKLEVEEEQEAAVLD
LSISHASNSTSVLPASKQSATSSVQSSSPAYSSDSESSDLLAKQTLPGPAGVFTVHSYAK
GDASGSDNEQTSGKKASATSSVNEQELTEMGKEYVSSMKESKKSKGRRQPLSKLPRHHPL
LVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQPPYCA
VCMLFQAYQAECEGSSQNSGVIPAVVDGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEED
GTSVLITCKNCHVCVHASCYGVSPEKATEDWMCSRCTENALEEDCCLCSLRGGALQRAND
DKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHG
RCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKH
KNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTD
GQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRFTEI
FEEKEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaatcccgggcagcgcatcatgaccttccgccccacc
atggaggagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccggactggccaagatcgtgccgcctaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccctgcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttccgcaggatc
gccaacagtgacaagtactgcacaccccgctacacagactttgaagaccttgaacgaaaa
tactggaagaaccttacgttcaatgctcccatctacggggctgacgttaatggcacgctc
tacgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctggatgttgtg
gagaatgaaagtggcataaccatcgaaggagtgaatactccttacctatattttggaatg
tggaaaacttcatttgcttggcacactgaggacatggatctttacagtattaattacttg
cattttggggaacccaagtcatggtactccatccctccagagcatgggaagcggctggag
agacttgcgaaaggattttttccaggaagtgcccaaagctgtgaagcatttcttcgtcac
aagatgactctcatttctccatcaattctgaagaaatacggaattccatttgataaggtg
acacaggaggctggagagttcatgataacctttccttatagctatcatgctggctttaac
cacggcttcaactgtgctgaatctaccaactttgctactcttcgctggattgagtacggg
aagcagtcggtgctgtgctcatgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagatcgttacaagctttggaaagctgggaaggacgtgactgtc
attgaccatgctcttccaaccccagaggcagcagagttccttaaaggggatctcatgcaa
aaagtcaagaatgggaaacactgtgctgaggagatggaaacagaagaggcttgtaaagag
gaggtggatggggatgagacaaaaagcatccccaagcaccgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccctaaggaggag
ctgagctccacacagtatgaagcggatatggcagagccttgcgagaggcccacaaatgaa
tttgtgcagcaaggtgaacaaaggctcaaacttccagatggtgtggagtcagccaaattt
gaagaattgaaaacggtgaagcttgaggtggaagaagaacaagaagcagctgtactggat
ctctccatttcacatgcttcaaattccacttcagtgttgccagcttcaaagcagagtgct
acatccagtgttcagtccagctcacctgcctattcttcagactctgaatcatctgatctg
ttggcaaaacaaactcttcctgggccagccggggtgttcacagtccacagctatgctaag
ggggatgccagcggatctgacaatgaacagacttcagggaagaaagccagtgccacctcc
agtgtcaatgagcaagaactgacagagatgggaaaggagtatgtaagctccatgaaggag
agtaagaagtccaagggtcgtcgccagccgttgagcaaactcccacgtcaccacccactc
ctggtgaaggactgcatcagtgatgatgaggcatcagagcaactaactcctgaagaagag
gctgaggagacagaagcatgggccaagccactgagccagctgtggcagaatcggccacca
aattttgaggctgaaaaggaatacaatcgcaccatggcccagcagcccccatactgtgct
gtttgtatgctcttccaggcgtatcaggcagaatgtgaaggcagcagtcaaaactctgga
gtaattccagctgttgtggatgggaagatccgaactaaacccctgattcctgaaatgtgc
tttactgcaactggctgcagcactgacctcaatctttccactccctacctggaggaagat
ggaaccagtgtactcatcacctgcaagaactgccatgtctgtgttcatgcaagttgttat
ggtgtatcccctgagaaggccactgaagactggatgtgttcacggtgtacagaaaatgcg
ttggaagaggactgctgtttgtgttcattacgaggaggagcactgcagagagccaatgac
gacaagtgggttcatgtgatgtgtgctgtggctgtactggaggcaaaatttgtgaacatc
gcagaacggagtcctgtagatgttggcaaaatccccctgcagcgtttcagactgaaatgc
atcttctgcaagaagaggagaaagagaattgcaggttgctgtgtacagtgctcacatggt
cggtgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtcatgatgcagcct
gatgactggccatttgttgtcttcattacctgcttcaggcataagaccccatctcaggca
gagcgagccaaggctgcactccaggatctgtcccctgggcagatagtcatcagcaagcac
aagaatggtcgcttctatcaatgtgaagtggtcagccttgcaaaggagactttctatgag
gtcaactttgatgatggctccttcagcgataacctgtacccagaggacattgtgagtcga
gattgtcttcagttaggtccccctgctgaaggggaagtcgtgcaagtaagatggacagat
ggacaagtttatggagccaagtttgttgcatcacatgctatccagatgtaccaggtggaa
tttgaagatggttcacagctgatggtgaaaagggatgatgtatatactcttgaagaggag
cttcctaagagagtgaagtcaaggctgtcaatagcttcagatatgcgcttcacagagatc
tttgaagagaaggaggtcagtcaagagaggaagagacaaagagtgatcaattcacgctac
cgtgaagattatattgaacctgccttgtaccgggccatcatggagtaa

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