Pseudopodoces humilis (Tibetan ground-tit): 102104335
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Entry
102104335 CDS
T02921
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102104335 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102104335 (PRPF38A)
Spliceosome [BR:
phi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102104335 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
102104335 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102104335
NCBI-ProteinID:
XP_005521217
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaagacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgtttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctaaagatgctgcagatc
cagcccgagaaggacatcattgtggagttcataaaaaacgaagacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgactgctacaagtacctg
gaaccgctgtacaatgactatcggaaaattaaaagtcagaacagaaatggggaatttgag
cttatgcacgtggatgaatttattgatgagctactccacgaagagcgtgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgaacaacttgagcctcgt
gttagtgctctggaagaagatatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcaggaggggctacagggacctg
gacaagccccgcagatctccggtggtgcggtaccggcggagccggagcaggtccccaagg
aggcgcagccgctctccaaagagaagaagcccatcaccgcgccgggagcggcatcgcagc
aaaagcccgagacggcaccggagcagatcccgggagaggcgccacagatcgagatcaaaa
tctccagggcatcaccgtagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgaataa
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