Pseudopodoces humilis (Tibetan ground-tit): 102104414
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Entry
102104414 CDS
T02921
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102104414 (HMBOX1)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102104414 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
102104414
NCBI-ProteinID:
XP_014113117
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGH
SNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQDP
ISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacagacgagcca
agattcaccatagagcagatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
catgagatcctgcacgccctggaaaccttggaccgtcttgaccaagagcatagcgacaaa
ttcgggagaaggtctggctacggaggcggctcctacagcaacagcaccaacaacgtcccg
gcgtcttcctcgacggccacggcttccacgcagacccagcactccgggatgtccccgtcc
ccgagcaacagttacgacacctccccacagccttgcactacgaatcagaacgggagggag
agtaacgagaggttgtctgccttcaatgggaagatgtcacccacccgctaccccttggcc
aacagcctggcccagaggtcctacagcttcgaggcttccgaggaggacttggacatcgac
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cccgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggagagttacttcaatgagaatcaatatcccgacgaggcaaagagagaagaa
attgccaacgcctgtaacgcagttatacaaaaaccaggtaaaaagttgtcggatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatatcgcaatcctggagagccatggaatagatgtacagagtccaggaggtcat
tccaacagcgacgacgtggacggcaacgattactcggagcaggacacttggcaagtccgc
aatggagaggaggagggacgatgttccgagggaggcagagaagcagagaaggtagaagaa
gacaggaggatctgctccaaacaagatgacagcactagccatagtgaccaccaagacccc
atttccttagccgtggagatggcagcagtcaaccacaccatcctggcgctggcccggcaa
ggagccaacgagatcaagacagaggctctggacgacgactga
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