Pseudopodoces humilis (Tibetan ground-tit): 102104454
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Entry
102104454 CDS
T02921
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102104454 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102104454 (MBD4)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102104454 (MBD4)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102104454 (MBD4)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102104454 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102104454
NCBI-ProteinID:
XP_005522277
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAAPGAAGGPGGGGRGAAAAERPGPGPGPGCGDRGPAGPSAVPREWQRVSSRRRAGRTAG
RIDVYFVSPEGKKLRSKRALVEYLQKTGETTLKAADFDFTTPQGSTCSGLRGYGTGDVRT
DLEKEDCQSKVQELHAQNGAEIGIQNIQAGNGHLEDAASTVESTDLVMEGTISESLKTRR
KGTDGKSVQTRKCGKGSERRNQGDAKSKRQRRISNTGETECVQNKRGRRQTDTCGADSQA
VGADPVDAGKTLSGVPRARLRSVAGSQRELGHLPKEGPCSSDTPAVRSEEKSYGLEIGKV
PDPGDVAEQNVKCDTEVDAEPWDGTSFTAVRMSPEESVPRTQVERRKTSPYFSSKYSKEA
PSPPRRKALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYP
SPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYR
IFCVNEWKEVQPQDHKLNVYHRWLWENRESLSID
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggagcggcgggcggccccgggggcggcggtcgaggcgcggcggcggcg
gaacggcccggccccggccccggccccggctgcggggaccgcggcccggcggggcccagc
gccgtcccgcgcgagtggcagcgggtgagcagccgcaggcgggcgggcaggacggccggg
aggatcgacgtgtacttcgtaagccctgaagggaagaagctgaggtcaaaacgagcactt
gtggagtatttacagaaaactggggagacgacactgaaagcagcagattttgatttcaca
actcctcaagggagcacatgctcagggttgaggggatatggcacaggagatgtgaggact
gacctggaaaaggaggattgtcagagcaaagtgcaggagctccatgcacagaatggtgct
gagattggaattcagaacatccaggctgggaatggacacctggaagatgctgcatctact
gtggaaagcacagacttagtaatggaaggcacaatctcagagagtttgaaaaccagaaga
aaggggacagatgggaaaagtgtccaaaccaggaaatgtgggaagggctcagaaaggagg
aaccaaggtgacgccaagagcaagaggcagagaagaatctctaacacaggggagacagaa
tgtgttcagaacaagaggggccgtagacagacagacacatgtggagctgacagccaggct
gtgggtgctgaccctgtggatgcagggaaaactctgtcaggagtgcccagggcacggctg
aggtcagtggctggctcacagagggagctgggtcacctgccaaaggaggggccctgctcc
agtgatacacctgctgtgaggtctgaggagaaatcctatggactggagatagggaaagtg
ccagatccgggggatgtggctgagcagaatgttaaatgtgacactgaggtggatgctgag
ccgtgggacgggacaagcttcacagcagtcagaatgtcaccagaagagtctgtcccgcga
acacaagtggagagaaggaaaacgagtccatatttttccagtaaatacagcaaagaagcc
cccagcccacccagaaggaaggccctcagaaaatggactcctccacgttctcctttcaat
cttatccaggaaacactcttccatgatccgtggaagcttctcattgccaccatatttctt
aacaaaacctcagggaaaatggccattccagtgctctgggagttcctgaagaagtatcct
tctcctgaggtagccagggctgcagactggaaagagatgtcagagctgctcaaacctctt
ggtctctatgaactcagagccaaaaccatcatcaggttctcgggtgagtacctgagcaag
gcgtggcggtatcccatcgagctgcacggcattggcaagtacggcaatgactcctacaga
atcttctgtgtcaacgaatggaaggaggtgcagccacaagaccacaagttgaacgtgtac
cacaggtggctgtgggagaaccgggagagtctgagcatcgactga
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