Pseudopodoces humilis (Tibetan ground-tit): 102104540
Help
Entry
102104540 CDS
T02921
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102104540 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102104540 (TTC37)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102104540 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
Fis1_TPR_C
TPR_30
BTAD
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
102104540
NCBI-ProteinID:
XP_005530427
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQIDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIRMKQEEGAEKTELHQLWKKMIQLLKDSTRNQDNKTGQ
LLLTAFEHALHSADTVPGEDHQNLYKDFIQCLSKFPHELARLEKACHDMMALYPTMSYPL
EVLCLHFVQSGTLSEEALHCFTRLLEMDANSGPGIIGFGIKCLKENKYKEAVKRLTEGLE
KTNQCPAAWHYLAEAQMKIHEHRNAVLSCNQALQALGTTEGPNFRWKTLALQLKAEALIK
IADANAAEEAIKALEQIVDGSSDPVVLALRGQAYLNKGLMDQASKISQELLLSHPDLAEA
HALEGVIHYSQKNYEQAEKSFLNAIERKAGTAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYMGSAFCYLGNYYRDIAGDKTRARGCYKKAFELDETDEESGAAAVNLSVELG
DMDTALSILNEVTEKARPGAAKWAWLHRGLYYLRTGQPSKAVVDLQAAIRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPELVYSIYRAAALEQILGKYENAIATYQEILKKT
ENYVPALKGLGECYFMLAKSALDNYLDRKAVDYIEQALAYFTRAVQHCPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGFLLSKNATKQMLKKNELLILGGRCYGRALKLMSLPSIWCDL
GINYYRQAEHLTALGADMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCNAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLTTGNIEQAHEAFKIAQSLEPSYLLCWIGQA
LIAESVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDETNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGFLNECMHLKQQAAYAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGLCDKAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIKAYEKALSVAE
SEKDKAHVLTALAIIEYKLNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDEGIYERCLIASAVYALQGRNVAIQREVSKAIHSYPDNAALWSLLSRLV
PLYASKKTKGGAVAGSVAYTLDVNHGKEVLLNIAVNQLVAGCHMLEDKKNNPLKNIQKAI
HVCPENPAAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVSSVSAKTGESNLPRNYVRT
LEEWCLCQAITSLEETGKLSEAEALCNKGLKSCPEHPTLFLLLRQVQCKQLLQSHKELPD
NILEELRKTVMSTSSSAAAWQWLAKIYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEVCMANVSDEHWSSLVQEATTEALKLSPCPLAALLQALLQYNRKMGARETRR
MLERVVYHQPAHPETIVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNEKLS
ASA
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattgaagagtgctagagaagcaataagaaacaaa
gagtataaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtattcattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatacaaaaaggcaattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttgtatgagaaacccaaccaaatagatgtcaaaggagacttagcagatgtttac
caaaaacttttggaactctatgaaagtggtgacaagcagaaatggtgtgacgtatgtaac
aagcttgtggaactataccatcaagaaaagaaatatttagaggtggctgaaacttggcag
aagctaataaggatgaaacaggaggaaggtgcagaaaagacagagcttcatcagctttgg
aagaagatgatccagttactgaaagacagtacaaggaaccaggataataagactgggcag
ttgcttttgactgcatttgaacatgcgctgcactctgctgacactgttcctggtgaagac
caccaaaatctttacaaagacttcatacagtgcttgtcaaaatttcctcatgaactagct
aggttggaaaaggcgtgtcatgatatgatggctttgtaccctactatgagttaccctttg
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctgcactgt
ttcactaggcttttggagatggatgcaaacagtggtccaggcatcattggttttggtata
aaatgcctcaaagaaaataaatacaaagaggctgtgaagagacttactgaaggtttggag
aagactaaccagtgtccagcagcatggcattatctagcagaggcacagatgaaaatccat
gagcacaggaatgctgtcctgtcctgcaatcaagctcttcaggctcttggaactactgag
ggtcctaattttcggtggaagacccttgctcttcagttgaaagcagaggctttgattaaa
atagctgatgctaatgctgcagaagaagccattaaagcacttgagcagattgtagatgga
agcagtgatccagtggttttagctctcaggggtcaggcttatctaaacaaaggtttaatg
gatcaggcttcaaagatttcacaagagcttctgttgtcccaccctgatctggctgaggcc
catgctctagagggtgtcatccattattcccaaaagaactatgaacaagcagaaaaaagt
tttctaaatgctattgaaagaaaggctggaactgcagagtatcatcagtacctggggctc
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacatgggaagtgccttttgttatctaggtaactac
tacagagacattgctggagacaaaactagagctcgtggttgctataaaaaggcttttgaa
ctggatgagacagatgaagaatctggagcagcagctgtcaacttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaagtaactgaaaaagcaagacctggtgca
gcaaaatgggcctggcttcatcgtggactttactacttgagaactggtcagccgtcaaaa
gcagtggttgatttgcaggcagctatcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgaacagaggtagctactccacagctctgaaatccttcagg
aaagcaagtgaactgaacccagagctcgtgtacagcatttacagagctgcagcacttgag
cagattctgggcaaatacgaaaatgcaattgctacctatcaagaaattttaaagaagaca
gaaaactatgtgcctgcactgaaaggacttggtgagtgttatttcatgctggcaaaatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcatat
tttacaagggcagtacagcactgtcctgatgtatcttgcctctggaaactgttaggagat
acctgcactagtgtccatgttatttcaccaaccaaagtgaatgttcaagtactaggattc
cttctgagtaaaaatgcaaccaaacagatgctgaagaaaaatgagcttctcatactggga
ggaaggtgttatggcagagctctaaaactgatgtctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcactgggcgctgacatgaatgag
ataagtgagctgctagagaagtctttgcagtgtctcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcttgtaatgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacctgggggttttgtatctgacaactggaaacattgagcaagctcatgaa
gccttcaagatagcccagtctctggaaccttcttacctgttgtgttggattggacaggct
cttattgcagaatccgtaggcagctatgataccatggatctcttcaggcacacgactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtgtgttcaacgctgcag
gatgaaaccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagctgcccaagtggtcttgagcaaatacacagaaagaaatccagatgatgcttctgct
ttcacaatgcttgggtttttgaatgagtgtatgcatctcaaacagcaggcagcctatgcc
tatgagagggcagcttcactgttgaaaaattcagaggatactgagaaatacaatacagca
atgcaaaactatggcaggtcactgtgtgctcttgggctgtgtgataaggccatagaagtt
tacacgtcaatacccctaactgagtttgatggcattgtggggctagcattagcttacttc
aagaaaggactcttagaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaaaaagataaagcacatgtcctgactgccttggcaataatagaatataagctgaac
aaagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacattgggattggtaaagcaggatgcaacacttgcaacagcg
gcccttaaagaattactgaagcatgaaaaaggggatgaggggatttatgagaggtgtctt
attgcatctgctgtttatgcattacaaggtagaaatgtggcaatccagagggaggtctcc
aaagcaatacacagttaccctgataatgctgccctttggtctcttctgtctcgactagtt
ccactgtatgcatcaaaaaaaacaaaaggaggagctgtggcaggaagtgttgcatataca
cttgatgtaaaccatggaaaggaagtcctactgaatattgcagttaatcagttggtagca
ggatgtcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggccatc
catgtctgtccagaaaatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctaaacaacactgaaccaaaacgaacaggtctagagatgacactg
gtgtcttcagtttcagccaaaactggagaaagtaaccttccacgtaattatgtccgtact
cttgaagagtggtgtctgtgtcaagctattaccagtctagaggagactggtaaactatca
gaagctgaagctctttgtaacaagggtttaaaaagctgccctgagcacccaactctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggaacttcgcaagacagtcatgtccacttcatcctcagctgcagcctgg
caatggctggcgaaaatatatcagtctcagagaatgatgactggagcagagatgtgctac
agaaagagtctgcagttggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcaggctagctatgctcgcactggaagtctgcatggctaacgtctcagatgaacactgg
tcatccttggttcaggaggcaacaactgaagctttgaaactttctccttgccccttggca
gctctgcttcaagccctgctacagtataatcgcaaaatgggagcaagggagacccggcga
atgttggagagagttgtttatcatcaaccagcacatccagaaaccatagtgtcagtggca
cgctggtacctcctgcaacatctttatgccaaagatgattgtgaattaatagatgtgctt
atagaaaatgccaaagctaatggagatgttagagccctggaattaaatgagaagttgtca
gcaagtgcctag
DBGET
integrated database retrieval system
