Pseudopodoces humilis (Tibetan ground-tit): 102104578
Help
Entry
102104578 CDS
T02921
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102104578 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102104578 (MSH2)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102104578 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF6437
Motif
Other DBs
NCBI-GeneID:
102104578
NCBI-ProteinID:
XP_005523323
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVEPPREAVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTVHGADARLAARDLF
RTRAVIRQLAGAPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSVKENDW
YLAYKGSPGNLSQFEEVLFANNDMSTAIGVVGVKLSAADGQRVVGVGCVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDI
VQDLNRLLKSKKEEQLNSAALPEMEKQVAVSSLSAVIKFLELLSDESNFGQFELNTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTRIE
ERLNLVEAFVMDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNV
VEALEKHEGAHQMLLLAVFITPLTDTCSDFSKFLEMIETTLDLEKVENHEFLVKASFDPN
LTELREKMNELEEKMQSLLKTAAKELGLEAGKSIKLETNSQFGHHFRVTCKEEKALRNNS
KYGIIDTQKNGVKFTNSKLSTINDEYIRNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDAIVSFAHVSNAAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITF
EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICGF
AMFATHFHELTALAEQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKSYREREEGEKIIQDFLCQVKALPLTD
MSEEDIKVKLKQLRNDVLAKKNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccgccgcgggaggccgtgtggcccgagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtgctctcgctgcccgagaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggtgcacggcgcggacgcgcggctggccgcccgcgatctcttc
cgcacccgcgccgtcatccgccagctggcgggggcaccgggaactcagaagcttgagagt
gttgtgcttagtaaaatgaactttgaatcttttgtgagggacctccttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagcaaatctgttaaagaaaatgactgg
tatttagcttacaagggttctccaggaaatctttcccagtttgaggaagttctctttgcc
aacaatgatatgtccacagccatcggggttgtgggggttaagctgtctgctgctgatgga
cagagagtagtaggagtgggctgtgtcgacactaccctgagaaaattgagtgtttgtgag
ttcccagataatgatcagttctccaaccttgaagctctactggttcaactgggcccgaag
gagtgtgtgctgccaggaggagagactgcaggagagatgggaaaactgagacaagtcatt
cagagaggaggaatcctgattacagacaggaagaaggcagatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttgaaatccaaaaaagaagagcagctgaatagtgcagca
ctgccagagatggaaaagcaggttgctgtttcgtctttgtcggccgttatcaagtttttg
gagttgctgtcagacgagtctaattttggacaatttgaactgaatacttttgatcttagt
caatatatggttctagacaatgcagctgttcaagccctcaacctttttcagagttctgtg
gaaaatgcaaatactgcacagtctctagctggtttactgaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacaaccacttatggacaagaccagaattgaa
gaaagattgaatttggttgaagctttcgtgatggatccagaactacgtcagtgccttcaa
gaagatctgttacgtcgctttccagacctcaaccggctggcaaagaaatttcagagacaa
gcagcaaacttacaagactgttaccgaatgtaccaggctatcaatcaactgcctaatgtt
gtagaagcactagaaaaacatgaaggagctcaccagatgttgttgttggctgtatttata
acacctcttactgatacctgctctgacttctcaaagtttctggagatgatagaaacaaca
ttggacttggaaaaggtggaaaatcatgaatttcttgtcaaggcttcttttgatcctaat
ttaacagaattaagagagaagatgaatgagctggaagaaaaaatgcagtccttactaaag
actgcagcgaaagaactaggtttggaagctggcaaaagtatcaaacttgagacaaattca
cagtttggacatcattttagagtaacttgtaaggaggaaaaagctctccgtaacaattcg
aaatatggaatcattgatacacagaagaacggtgtgaaatttactaacagcaaactgagc
accatcaatgatgaatatataaggaacagggaagagtatgaagaggctcaggatgcaatt
gttaaggagatcattaacattgcttcaggttatgctgagcccatccagacaatgaatgat
gtgatagctcagctggatgccattgtcagctttgcccacgtgtcaaacgcagccccggtg
ccctacgtccggcccgtcattctggagaagggacagggcaggatcgtgctgaaaggtgcc
aggcatccctgcatcgaagtgcaggatgaggtggccttcatccccaatgacattacattt
gagaagggcaagcagatgttccacattattactggccctaacatggggggaaaatccaca
tacatccgacagacaggggtgattgttcttatggcccaaattgggtgttttgtgccgtgt
gagtccgcagaaataaccattgtggattgtatcctggctcgggtgggagcaggagacagc
cagctgaaaggagtgtctactttcatggctgaaatgctggagactgcttcaatcctcagg
acagcaactgaaaactccctgataatcattgatgagctgggaagaggaacctctacctac
gatggctttggcttagcatgggctatctcagaatacattgccagcaaaatctgtgggttt
gccatgtttgctacacacttccatgagctcacagctcttgctgagcaagtgccaacagta
aataacctccatgtcactgctctgactagtgatgacacactgacgatgctttatcgtgtc
aaggaaggtgtttgtgaccagagttttggaatacatgtagcagagttggcagctttccca
aaacatgtgattgaaagtgcaagagagaaggcattggagctggaggagtttcaaaatatt
ggcaagtccaaggaatctgaaggagaaccaccagccaagaaatcatacagagaaagagag
gaaggtgaaaagataattcaggattttctttgtcaagtgaaagcattgcccctgacagat
atgtcagaggaagacatcaaagtcaagttgaaacagctgagaaatgatgtgctggcaaag
aagaacagttttgtgaatgaaataatttcccgaacgaaagttacatcatga
DBGET
integrated database retrieval system
