Pseudopodoces humilis (Tibetan ground-tit): 102104874
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Entry
102104874 CDS
T02921
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102104874 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102104874 (TAF5)
03036 Chromosome and associated proteins [BR:
phi03036
]
102104874 (TAF5)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102104874 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
102104874 (TAF5)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102104874 (TAF5)
STAGA complex
102104874 (TAF5)
TFTC complex
102104874 (TAF5)
SAGA complex
102104874 (TAF5)
SLIK complex
102104874 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
102104874
NCBI-ProteinID:
XP_005520763
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPEAGTPPPPPAVPPAAAPAAAPAAAAEGEAAGVGGDAAPPKPA
APGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAVALSPASAGLLG
GSGSDADSGEALLGRGTSAAAVAIGGNVATVATSSPSVAAVAAVPPGKVGGAVVVEDQPD
VSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHE
SEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLL
KRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLL
KEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDK
LDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVW
SVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNY
LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY
QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAF
SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL
WDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAY
SSQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcagaagtggcggcggtgcagccggaccccgaggcg
gggacgccgccgccgccgcccgcggtgcctcccgccgccgctcccgccgccgccccggcc
gccgcggcggaaggagaggctgcgggagtcggtggggatgctgcacccccgaagcccgcg
gcgccgggcccggccgcctccccggcggcgttggaccggcagacgcttgtggccgtactg
cagttcctgcggcgcagcaacctccgcgagtccgaggagatcctacgtcgcgaagcccgc
ttgctcggcgacgacctgggtgctgtcgccctcagccccgccagcgccgggctcctgggg
ggctccggcagcgatgcggactccggcgaggcgctgctcggccggggcaccagcgctgcc
gccgtcgccatagggggcaacgtcgccactgtcgctacttccagccccagcgtggctgca
gttgccgccgtgccgccggggaaagtcggaggtgcggtggttgtggaggatcagccggac
gtgagcgcggtgttgtcggcctacaaccagcaaggagacccgacactgtacgaggagtac
tacagcggattaaaacacttcatcgagtgctccctggactgtcatcgggcagaattgtct
cagctcttttatcctctctttgtgcacatgtatttggaattggtctacaatcaacatgag
agtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgctattaccaggat
gacctgcgtgtattgtcgagcttaaccaaaaaggaacacatgaaaggtaacgagaccatg
ctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttaccaactcctg
aagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggagcatctt
tacattgacatctttgatggaatgcctcgcagtaaacaacagatagatgctatggttgga
agcttggctggggaggcaaaacgagaggctaataaagcaaaggttttctttggcttgttg
aaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaa
ggaaagccaaagaagaaaaaacctaagaaagataatgtagggtcaaaaagtaaaaaacag
gatcctaatgctcctccccaaaacagaattcctctgccagaactgaaagactctgacaag
ctggataaagtaatgaatatgaaggaagctgcaagacgagtgcgtcttggaccagagtgc
ctgccctccatctgtttctacacattccttaatgcttatcagggtctaactgcagtggat
attacagatgactccagcatgattgtaggaggctttgctgactccactgtcagagtgtgg
tctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctcattgac
aaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaag
attttatatggtcacagtggacctgtctatggcaccagcttcagtcctgataggaattat
ctattgtcctgttctgaggatggcaccgtgagattgtggagtctccaaacattcacatgt
ttggtgggatataaaggacacaactatcctgtttgggatacacagttctctccttacggc
tattactttgtttctgggggacatgacagagtggctcgtctgtgggcaacagatcactac
cagccattacggatctttgctggccatcttgcagatgtgacatgtacccgatttcatcca
aactccaactatattgctacaggctcagcagacaggactataaggctgtgggatgttttg
aatgggaattgtgtaagaatattcactggacataagggaccaattcattcattggcattt
tctcctaatggacgattcctggctactggagcaacagatggaagagttctgctgtgggat
attggacatggcttgatggttggcgaattgaaagggcacactgacactatctacgcgctc
agattcagtagggatggggagattttagcatcaggttcaatggataacacagttcgtctg
tgggatgctgtgaaggcttttgaagacttagaaaccgatgacttcactacagccactgga
cacataaatttgcctgaaaactcacaggacttgttactgggcacatacatgaccaaatca
acccccgttgttcatctccatttcacacgcaggaacctgctgctggctgcgggagcctac
agctcacagtag
DBGET
integrated database retrieval system
