Pseudopodoces humilis (Tibetan ground-tit): 102104996
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Entry
102104996 CDS
T02921
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102104996 (ZSWIM8)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102104996 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
102104996
NCBI-ProteinID:
XP_005520580
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAESACEAGRTHSQELGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDAGVYFSEG
PEPTVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGMSLKPEEVGENGAAGGGDDGED
EDDYQVYYLNPQEVAKEDDDKAEGGIDEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SSEACRLTVELARDLLANPPDLKVEQPPAKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMIMYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVASQKSPSKHAAQSAAAIQQLPGTSVTQQAPVSTAVQSSPENFVEK
STQESSQRSPCEPATEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGAR
AASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAPS
LAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttcctttatctctgaggcagagagcctttgtcagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaagtttatcctccagtgcctgaacagctgcaacttcgaatcgccttc
tggagcttcccagaaaatgaggaggatatcaggttgtactcatgcttggcaaatggcagt
gcagatgagttccagcgaggggaacagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccacctgagtgccactgtggtgcccccacagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcatgcagctgcacctgc
ggggccggggccaagtggtgtgctcacgtcgtggcgctctgtctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggctacaaagagac
cagttgcaaaaatttgctcagtacctaatcagcgaacttccacaacagattcttccaacg
gctcagcgcttgctggacgagttattatcttcccagtctactgccatcaacacagtatgt
ggggccccagatcccactgctggaccttctgcctcagatcaaagcacctggtacttagat
gaatctactttgagtgataacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgaggaagagaacctgaaggaatctggaacttg
ctttccatcgtgcgggagatgtttaagagacgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataaccggctggtggtacagcgtgcga
acatctgcttcacacagcagtgctagtgggcacacagggcgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaagtccctagaaaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactcattctgttgggtaaag
gccatccagcagaggagctgccggttgcagtgtgcagaaagtgcctgtgaggctggtagg
acccatagccaggagcttgggggaccatgtctgcagcctggggacaggctgcggccttct
ccccaggagccggcggttcgtcccaaggaacttactgggaagcggaaagttgtctctgaa
acgccacagagggttctgagacggctctcggcagaaggggataaagctgtctacaagact
gcagtgagcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagtgaggacagctctctggagccggacttggcagagatgagcctggat
gacagcagcttggcactgggggcagaagccagcaatacctttagttttacagaaagtcca
ctgagcaggagctacagggatgcctttgaagaggatgctggagtgtacttctcggaggga
cctgagcccactgtcaggagcagttccatggccaagaaatcccccaaggatcctgtgggg
gagatgggtagtggcgatgatgacctgccttccgcggatgagaactctggtggcatgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggcgatgatggagaagat
gaagatgattaccaggtgtactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaattgatgaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggcactgtatgcacatggatac
agtagtgaggcttgccgcttgactgtagagcttgctagagacctactggccaaccctcca
gatctcaaagtggagcagccaccagctaagggcaaaaagaacaaggtgtcaaccagcaag
cagacgtggatggcaaccaacactttgtctaaagctgctttcttgctgactgtcttgagt
gagcggctggagtaccacaacctggcattccgaataggaatgtttgctttggagctgcag
agaccacctgcctctaccaaggctctggaggtaaagctggcttatcaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaatactattagaggaaga
gctgaggaactgcgagaaggaactttgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacgggctccaggccc
ccaagccgtaattggaataatgaaatgcctggagatgaagagcttggttttgaggcagct
gttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgag
ggcacacgaagggagaaaggggatctggctctagccctgatgattatgtacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaacccacaaa
ccacagacgctgagttccttctactcatccagcaagcctacagttgcaagtcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccaacagcttccagggacttctgtc
actcagcaagctccagtaagcactgcagtacagagcagtcctgagaactttgtggagaag
agtacacaggagagctctcagaggtccccctgtgagccagctacagaggccactgttttg
aaacaagaaggaaaggtccccagtcggctggcccttggaaaccgaggtggatacaatggg
agatgttggggttcacctgtcaggcagaagaaaaagcacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccaacgctcagtcggcgtcccctacgt
gggggctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattcactaggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggaaagccatgctcct
catgtcccaaaccagccctcagaggcagctgcgcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctcgatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtat
gcactagggctgcacaacttcgtgtctcccaactggctctctcgaacttactcctcccat
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcccccagaggtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccatgccctgaacccaaacgagatccagagagctctggtgcagtgtaaggaacag
gacaacctgatgctggaaaaggcctgcatggcagtagaagaggcagccaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttatgaacagact
gttggtggcaccccagcccagagagaaggtgccactggctgcagcgccggtggtgcgcgg
gccgcgtctgaagcagcgcgtggcttggcagacagccgggtgacctcagagccgaccacg
gtgacagtggcagctgcagtaactgcagcagcaaccgtcatgccagtgatctctgtgggg
tcaaccatgtaccagcagcacacggtcgcagggccagcaatggcacacacacacacgcag
ggtctccacccttacaccacccttcagactcacatcccctgtaatccccagtatatcgga
cacactatccagcacatgccgcgcccagctgtcttcccagtccctggctcggcgtatcca
cagggtgtccatccagcattcataggggcgcaatacccttactcagtaacggcaccgtca
ctggcagctacagcagtgtccttccctggcgtgcccgtcccctccatgacgcagatcgcg
gtgcatccctaccacagtgagacgggactgtcgctgtcttccaatgtagcgctaggcagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctca
cagcccaactcccttgttacagggggctttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccaccc
tacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactatgtg
catcagttttgcgttggtgcagccaagggggtgctgagcccttttgtgctccaggagatc
atcatggaagctctacagaggctcaaccccgcgcatgtgcacaaccacctgcgcacccca
gccttccaccagctggtgcagagatgccagcaggcttatatgcagtacatccatcatcgg
ctgatccatctcaccccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacgaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcaccatga
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integrated database retrieval system
