Pseudopodoces humilis (Tibetan ground-tit): 102105062
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Entry
102105062 CDS
T02921
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102105062 (FOCAD)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102105062 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
PEX6_N
Motif
Other DBs
NCBI-GeneID:
102105062
NCBI-ProteinID:
XP_005522712
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MLDDIKKRFEFPNAVVQSQAVGHLIAAILKEKVSSNKIRQASDQTPALNLLWEKCCSENV
ALRTACCEGLVALVVEKHAELDYVLHGALNLIPSARNVHGLVKTICKLIQIQAIQLGKDG
DESVWSLYGIRSTPHPLITVLENRPDCWPVLLQQITVFFHQCPERAEGLCVGIMASFLRY
LYCEPSQLREYAELRMGLLKVLLQPHGPKNKEAPSMLECEILQLLCDLIPHLQLKDLLQV
TEALFFLQELFLSLLRYPSFWKVQLSQLSLQLLCFCEVCLNVTGECSSLISLIEDNFELL
KEVFPVDQFVIGLALLLLQTPESQQKSVLSLAYKLLSCSETQDISTTALSLVMPVLQILS
STTVGDCLSGDVSGTTRQQLAVNLFGLLKEKSANDKQESVSYKLLCPITSSYSSLCTTWK
IMELMKEKSAVSKWLSSVKSLLPVSTQVPAHVFLLLAYLLVQENGDSLRDVLQATTEIAK
ADCSQVPNLIPVLIFKLGRPLEPALYREIMYTLPTLGVHKVCVAQILRAIHMLGSTPKLR
AIASRLMTSLWERQDRIYPELQKFLAMSDMPSVSVDKEAQWEKLIAKAACIRDICRLRPY
QHGADMLAAISQVLNECTKPDQASPAAIVLQGLRALCEAEVVCIRSTWNALSPKLSCDTR
PLILRALNELFSLVPSLTVNTNEFEKFKAQVISFLWNNTQNKDALVAISAYKSLSSFDSE
EHTILHLPEQARPEVNSLEEIDMNEDEEDQEANLFVPGSSYIKLLSLTPAAVLGAFEEFA
TSLVKQEMTSMPRAVYHSALRGAATRSDQGKTVAGVPNFLLKMYERNKQPGMTPGLAAGM
LLCFDLPVHMGKDGKPINRFLASRGRNFQQMLVALIHEVNIQPSEWHHSILLPQTWLGFM
SRTYNAVLQGRQAELEMQLKHGKEDPEEVQYKQFTAWLWVRDMLTDVIKGASKDSPVVKG
NSIFALTGLAVAVAKYESSLSSDTEGVPETEPDFIPMKHWISMVTETLLSIVNSRYQPKG
QVFPWFYQKSYSGENTASIIARSCAATALSLLVPIFIVSYKEKIEEVLSMLTDRLPGKPN
ADESQAVQIHMGLGLGMFISRLYEEKVSDIPGQQMNLVLMKSVDVLEDCCFDTSLEYNTG
CILGVGLVLSFMSHSSQTESRVHVSASLRKLFKYLDTSEYQSRGIQEVLAYSVACSSVSA
FSVGIIEAAEAEKAMSKLRTLAEDNQQTYSFALALGAIVHGLSACGHGKAEDLSNRLMPA
WIKTVLAEGFPTMERLAAVSGLVALVGSEGGMIQLKSETIQSSQFQSKLNEVIRTLTQII
SLSEQIGLQTNAVRLLGRLHMSCLSSTQNRASVPPDFSYLPVNSFIRAAIDFAIESGKKG
PESVPAELVKVALAPIALVGESYQYPPVNWASILSPLMRLDFGDEVKHLCLELAVTQAQS
SQNAAMLLGMWVAPPLIYSLSMKTQKYLFMSLSLWMQHVAEDKLQSFTEVLLIQQFEVKN
RTKRPEICQCVLQGLIQAMKLPNPAQFCWSFLCQAVEKIYELLPNEVQRSELEMYVDVAR
CISEMADSEINRIVQISKNNIEKATFMKVYLISQGRLSLTNLSAVIETVAGYQQKENILW
MFLHSFYHARIVRHENTGVLKRMDWLLDLMGYIRNAAYRSTPLQNVDLKECIDFLMWLFA
ASVLAWADHGAPLLLGLSADWSLCKPHMVSPELSEEHIGMHSTDKFAVQETLTLLPNSLS
LLLAKEPWKEQTQKFIDWLINMMECPKEALSKSSMDLLKVALLALRSLAEFKKKAVWTKA
YGW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgacatcaagaagcgatttgaattccctaatgccgttgttcagtcacaggca
gtaggccatctgattgctgcaatactgaaagaaaaagtttcttcaaataagatcagacag
gcttctgaccagactcctgctctgaacctgctttgggagaagtgctgcagtgagaatgtt
gccttgcgaacagcctgctgtgagggtttggtggcacttgtggtggagaaacatgctgag
cttgactatgttcttcatggagctctcaacctaattccctcagcaaggaatgtgcatggt
ttagtaaaaactatttgcaagttaatacaaattcaagctattcaactgggaaaagatgga
gatgagtctgtttggagtctgtatggaatcaggagcactcctcatccattaattactgtc
ctagaaaacagacctgattgctggccagtcctactacagcagataacagtatttttccat
cagtgtccagagagggcagagggtttatgtgttggcataatggcttcatttctacgatac
ctgtattgtgaaccatcccagttacgggaatatgctgaactgcgaatgggtttacttaag
gtcttactgcagcctcatggcccaaagaacaaagaagcaccctccatgctggaatgtgag
attcttcaacttctttgtgatttgattccacacttgcagcttaaagacttactgcaagtt
acagaagccttgtttttcctgcaagagctgttcctcagcctactacgctatccttcattt
tggaaagttcagttatcccagcttagtcttcaactattatgcttctgtgaagtgtgttta
aatgtaacaggagaatgctcatctttgatctccctaatagaggacaactttgagctctta
aaagaggtgtttccagtggaccagtttgtaattgggctagcacttctactgctgcaaact
ccagaaagtcagcagaagtctgtcttgagtctagcctacaagctcctttcatgttcagaa
acccaggacatctcaaccacagcccttagtttggtgatgcctgtgctacagatcttatct
tctacaacagttggagactgcctgtcaggggatgtttctggaactaccaggcagcagctg
gctgtaaatctatttggattattaaaagaaaaaagtgcgaatgataaacaggaatcggtg
tcctacaaactcctttgccccataaccagctcttacagttcattatgtacaacctggaag
atcatggagctcatgaaagagaagtctgcagttagtaagtggttatcttcagtgaagtca
ctgctacctgttagcactcaagtacctgcccatgtttttcttttgttggcttatctactg
gtccaagaaaatggagacagtcttcgtgatgtactccaggctacaacagaaatagccaag
gctgattgttctcaggtcccaaatctgatcccagttctgatatttaaattggggagacct
ctggagcctgcactttacagggagataatgtatacattgcctacacttggtgtacataag
gtttgtgtagcccagattctacgtgctatacacatgctggggagcacacctaagctcaga
gcaattgcctcgcggctgatgacatcattatgggaaagacaggatcgaatttacccagaa
ctgcagaagttcctggcaatgtctgatatgccctctgtgtctgttgacaaagaagctcaa
tgggaaaagctgattgctaaagctgcttgtataagagatatatgtaggctgagaccgtac
cagcatggagcagacatgttggctgcaatttcccaggtattaaatgaatgcacaaaacct
gatcaagcttcccccgctgccatagtattacagggtctacgggcactttgtgaggctgag
gttgtttgtatccgttctacatggaatgctctgtcaccaaagctgagttgtgatacaaga
ccactcattttaagagcactgaatgaattgttttccctggttccctcactaacagtgaat
acaaatgaatttgagaaattcaaagctcaagttatcagcttcctttggaacaatacacag
aacaaggatgcccttgttgctatttcagcctataaatcactctcatcatttgactctgaa
gaacatacaattcttcatctccctgaacaggcacggccagaagttaactcactggaagag
atagacatgaatgaagatgaagaggatcaggaggcaaatctatttgttccgggttcttca
tatatcaagctgttgtctctaacaccagctgctgttctaggagcatttgaagagtttgca
acatcacttgtgaaacaggagatgaccagcatgcctcgtgctgtgtatcattctgcctta
agaggagcagccacacgctcagaccaggggaagacagtggcaggtgttccaaatttcttg
ctgaaaatgtatgagaggaacaagcaaccaggcatgacaccaggccttgcagccggcatg
ttgctgtgtttcgacctcccagtccacatgggcaaggatggcaagcctattaatcggttt
ctggccagcaggggccgcaatttccagcaaatgttggtcgccctcattcatgaggttaat
attcagccttctgaatggcaccactccatactgctgccccagacatggttaggatttatg
agtcgaacctacaatgccgtcctgcaggggaggcaggctgagctggagatgcagttaaaa
catggaaaagaggatcccgaagaggtgcaatacaaacagtttacagcctggctatgggtc
agagatatgttgaccgatgtcatcaaaggtgcttccaaagacagcccagtggtgaaagga
aactctatttttgctttaactggccttgcagttgctgtagccaaatatgaaagcagcctt
tcttcagacactgaaggggtgcctgagaccgaacctgattttattcctatgaaacactgg
atttccatggtcacggagaccctcttgagtattgtcaatagccgctaccaacctaaaggt
caagtcttcccatggttctatcagaaatcctattcaggtgaaaatactgctagtattata
gctcgatcctgtgcggccacagcgttgtctctcctggtgccgattttcattgtgtcatac
aaggagaagatagaggaggtcctgagtatgctgactgacaggttacctgggaaaccaaat
gctgatgagtctcaagctgttcaaatccacatgggtcttggtttagggatgttcatctca
cgtttgtatgaagaaaaagtcagtgatatacctggtcagcagatgaacttggttctcatg
aagtccgtggatgtgttggaggactgctgctttgacaccagcctggagtacaacactgga
tgtattttaggagtaggacttgttctttcatttatgagtcacagtagccaaacagaatcg
cgagtgcacgtttctgcttcattgcgaaaactcttcaaatacctggacaccagtgagtac
caaagcagaggaatccaggaggtgcttgcctattctgtggcctgttccagtgtctctgct
ttcagtgttggaatcatagaagcagctgaggctgagaaggctatgagcaagctacgaacc
ttagcagaagataatcagcagacctacagttttgctttagctttaggtgcaatagtacat
ggattgtcagcttgtggtcatgggaaagctgaagacctgagtaacagactaatgccagcc
tggataaaaactgtgcttgcagagggttttccaacaatggagcgtctggctgctgtcagt
gggctagttgcactggtgggctctgaaggaggcatgatacagctgaaatctgagaccatt
cagtcctcacagtttcaaagtaagctaaatgaagtgatcagaacccttacacagataatt
agtctctcagagcagattggtcttcagacaaatgcagtaagacttctgggacgtcttcac
atgtcctgtttgtcttctacacagaacagggcatctgttcctccagattttagctactta
cctgtaaacagctttatcagggcagccattgactttgccattgaaagtggaaagaaaggc
cctgaatctgtcccagctgagctggtgaaagtagcactggcacccattgcattagttgga
gaaagctatcagtatccacctgtaaactgggcatcaattctttctcctttgatgaggctg
gactttggtgatgaggtgaaacatctctgccttgaactggctgtgacacaggcccagtca
tctcaaaatgcagcaatgcttttagggatgtgggtggcacctccccttatctacagtctc
agtatgaaaactcagaaataccttttcatgtccctgtccctgtggatgcaacatgtcgca
gaagacaaactgcagtcttttacagaagtgcttctcatacagcaatttgaagtgaagaac
cgcacaaaaaggccagaaatttgccagtgtgttctacaggggctcatccaggcaatgaaa
cttcccaaccctgcccagttttgctggagctttttgtgtcaggctgtggagaaaatatat
gagcttcttccaaatgaggttcagagaagtgaactggagatgtatgttgacgtagcaaga
tgtatttcagaaatggccgattcagagatcaatcgcattgtccagatctccaagaacaat
atagagaaggccacgttcatgaaagtgtatttaatttctcaaggcagattgtctctgaca
aacttgagtgctgtgattgaaactgtggcaggatatcagcagaaagaaaatattttatgg
atgttcttgcatagtttctatcatgctcgcattgtgagacatgaaaatacaggagttctg
aaaagaatggactggctgttagacttgatgggctacatcagaaatgcagcatacaggtca
acacccttacaaaatgttgatctcaaagagtgcatagatttcctcatgtggctctttgca
gcttctgtgttggcctgggctgaccatggtgcaccattactgcttggcctcagtgctgac
tggtcactgtgtaaaccacacatggtatcaccagaattatctgaggaacacattggcatg
cactccactgacaagtttgctgtgcaagaaactctcactctccttccaaatagcctttcc
cttttgctggctaaagaaccatggaaagaacaaacacagaagtttattgactggctgatc
aatatgatggaatgtcctaaggaagcattatcaaaatcttccatggacctgctgaaagtt
gcacttctggccttgaggtctcttgcagagttcaagaagaaagcagtatggactaaagct
tatgggtggtag
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integrated database retrieval system
