Pseudopodoces humilis (Tibetan ground-tit): 102105086
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Entry
102105086 CDS
T02921
Symbol
TMC1
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phi02000
]
102105086 (TMC1)
03037 Cilium and associated proteins [BR:
phi03037
]
102105086 (TMC1)
Transporters [BR:
phi02000
]
Other transporters
Pores ion channels [TC:
1
]
102105086 (TMC1)
Cilium and associated proteins [BR:
phi03037
]
Other cilia and associated proteins
Stereociliary proteins
102105086 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
102105086
NCBI-ProteinID:
XP_005530430
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MAFTVELWDEVGSSSGIRVPEIQFTASNGDLEFEDDPFDPKPVNMENEPDLFSPNLHNNW
WVQQQPLTAGHLEIVQAIVAPVIYHQQRPPAWEDGSDDNEEGSAAENEETAKGTDKERKR
ATPRTRRAHARGRGRHGDEEDEDDEGGTRRAGHRRHRSRRRGRAAGNDASDSDMEPAKAR
KNQANQKSKEDDEEKEDEKGGKSGKGKNEKKGDKKPDKKGKKEKANKKKKDKKKSGSGSD
SESEEEPITEEELAKLKEEVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGK
GKGKKFYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMY
GINMILFGLTFGLVMVPEALMGKPYGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLF
YGYYNNQRTIGWLKFRMPLSYFLVGVGSIGYSFMIVIRTMAKNANDDGGGDDTSFNFSWK
MFTSWDYLIGNPETADNKFASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTL
AGSGYLIFFVVRRSQKFALEGLENYGWWERNEVNTVMSLLGMFCPTLFDVISSLENYHPR
IALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENST
APPIQVDPADVPRGPCWETMVGQEFVRLTVSDMMTTYITILIGDFLRAVFVRFFNYCWCW
DLEYGFPSYSEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCC
NVPQERVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISE
TLEHDFPSWFGKVFGYASNPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQTSRR
KXKKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacagtggagctatgggatgaagtggggtcaagctctgggatcagggtccct
gaaatccagtttactgcctctaatggggatttggaatttgaggatgatccctttgatcct
aaacctgttaacatggagaatgagcctgatttgttttcccctaatttgcataacaattgg
tgggtccagcagcagccactaacagcaggtcatttagaaattgtgcaagcaattgttgca
cctgttatataccaccagcaaagacctcctgcatgggaagatggcagtgatgacaatgag
gaaggcagtgcagctgagaatgaagaaactgccaaaggaacagataaagagaggaagaga
gcgactccaagaaccagaagggcacatgccagagggagaggcaggcatggtgatgaggag
gatgaggatgatgaaggtgggacaaggcgagctgggcatcgcaggcacagaagccgtaga
cgagggcgagcagctggaaatgatgccagtgattctgatatggaacctgcaaaagccagg
aagaatcaagcaaatcagaaatccaaggaagatgatgaagaaaaggaagatgagaaaggg
ggtaaaagcgggaaaggtaaaaatgagaagaaaggggacaaaaagcctgataaaaaaggg
aaaaaagagaaggccaacaagaagaaaaaagacaaaaagaaatcaggatcaggctctgat
tctgaatctgaggaggagccaattacagaggaggagttggccaagctgaaagaagaagta
gaagaaaaaaagaaactgattgccacgctacgaaacaaaccatggaagatgaaaaagaag
ttgtctgtcctgaaggaagcacaactttttgttgaaaagtttgaaggtgctcttggaaaa
ggaaaaggaaaaaaattctatgcatacaaagtgatgatgactaagaaatggatgaaattt
caaagagattttgaaaattttaagacagcctgcataccctgggaaatgaaaattaaggag
attgaaagtcactttggctcatcagtagcatcttatttcatattcttgcgttggatgtat
ggaataaacatgattctctttggactgacctttggtcttgtaatggtgcctgaggctttg
atgggtaagccatatggctctttgcctagaaaaactgtcccaagagctgaagaagcaact
gctatgaattttgctactctctgggattttagtggttttgcacagtattcggtacttttt
tatggttattacaacaaccagaggacaattgggtggctcaagttcaggatgcctctttca
tatttccttgttggagttgggtctattggctatagctttatgattgtcattcgaacaatg
gcaaagaatgcaaatgatgatggtggcggggatgacaccagttttaatttcagctggaaa
atgttcacaagctgggactacctgattggcaatcctgagacagcagataataagtttgcc
tccatcacaacaagctttaaggaagcaattgtggaggagcaggagagccgaaaagaagaa
aatattcatttgactcgattcctaagggttcttgctaacttcttagccctatgcacactt
gctggaagtggctacctcatcttttttgttgtcagaagatcccagaaatttgccttggaa
ggtctggagaactacgggtggtgggaaagaaatgaagtgaacacagttatgtcactttta
ggaatgttttgtccaactttatttgatgtaatcagttctctggaaaactaccaccctcga
atagctctaagatggcagctgggaagaatctttgctctttttcttggcaatctctacact
ttcattatcgccttaatggatgaaatcaacctcaagttggaagaagagaagatagtaaag
tataacatgacaatttgggaagccagtctgtacaatggtacgattccagagaattcaact
gctcctccaatacaggtggatcctgctgatgtccccagagggccatgctgggaaacaatg
gtaggacaggaattcgtgcgtctgacagtctctgacatgatgacaacatacataacaatt
ctaatcggcgattttttgagagctgtctttgttaggtttttcaattactgctggtgctgg
gacttggagtatggatttccatcatattctgagtttgatataagtggaaatgtgctgggg
ctgatctttaaccaaggcatgatctggatgggatcgttttatgctccatgtctcccagca
atcaacgtgtttcgtctccacacgtcgatgtacctgcagtgctgggcagtgatgtgctgc
aatgtcccccaagaacgggtcttcaaggcttccagatccaataacttctacatggccatg
ctgcttttcatcctctttctctccacactgcctgctgtgtacaccattgtttccatccca
ccatcttttgactgtggtcctttcagtgggaagactagaatgtttgaagtcatatcagaa
actctggagcacgactttccttcctggtttgggaaggtatttggttatgcctctaatcct
ggacttatcctaccctttatattgctgatggtcctgagcatttactatctcaatgcaaca
tccaaatcctacaaggaagcaaacttggaacttaaaaagaagttacaaacaagcagaaga
aaataaaagaagaaataa
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