Pseudopodoces humilis (Tibetan ground-tit): 102105111
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Entry
102105111 CDS
T02921
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04514
Cell adhesion molecule (CAM) interaction
phi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102105111 (CNTN1)
04517 IgSF CAM signaling
102105111 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102105111 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phi00537
]
102105111 (CNTN1)
Cell adhesion molecules [BR:
phi04515
]
Immunoglobulin superfamily
Contactins
102105111 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phi00537
]
Others
102105111 (CNTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
F22D3_4_N
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
Fn3_VIN3
Fn3_ROS1
Interfer-bind
Tissue_fac
Ig_ANOS1
DUF4998
Big_3_4
NDNF
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
102105111
NCBI-ProteinID:
XP_005519338
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MVLQCTIPFEIMAEQKISICFFIYHLIIPCFVYSLAVEEGNKGYGPVFEEQPIDTIYPEE
SSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKERYSMVGGRLIISNPEKSRDAGKYVCV
VSNEFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN
EFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSDR
AKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVLK
IFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYWPCVATG
KPIPSIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENMHGIIYANAELKIVASPPTFE
LNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTK
LDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDL
TFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASA
DLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDP
SDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG
GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPP
STQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEMSVSWHHVSDKS
VEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSSTI
DVVTRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLFS
TGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAVGVPTLLLVLVVPALGVLAC
SGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggtattgcaatgcacaattccttttgagataatggcagaacagaagatatccatttgt
tttttcatctatcatcttattataccttgttttgtctactccctggcagtagaggaagga
aacaaaggttatggacctgtttttgaagagcaacctattgataccatctatccagaagaa
tcttcagatggacaagtttcaatgaactgcagagctcgagcagttccttttcctacttac
aggtggaaactcaacaactgggatattgatttaacaaaggagcgctacagtatggtggga
ggcagactcattatcagtaatccagagaaatcaagggatgctggaaaatacgtttgtgta
gtgtcaaatgagtttggaactgtcagaagcagtgaagccactctgagttttggatatctg
gatccctttccacctgaggaacgttatgaggttaaagtgcgagaaggtgttggagcagtg
cttctttgtgagcctccttaccactacccagatgacctcagttatcgctggcttctaaat
gagttcccagtgttcattgctttggataaacgacgatttgtgtcacagacgaatggcaat
ctctacattgcaaatgtggaagcatcagataagggcaattactcatgttttgtgtccagc
ccttcgataacaaagagtgtattcagtaaatttattccacttattccgcaatctgatcga
gcaaaagtatatcctgctgatatcaaggtgaagttcaaggacacgtatgctctcctgggg
caaaatgtgacactggagtgttttgctcttggaaatccggttcctgaactcagatggagt
aaataccttgaacccttgccagcctctgctgagataagcatgtctggtgcagttcttaaa
atcttcaatattcagtatgaagatgaaggactttatgagtgtgaagctgaaaactataaa
ggaaaagataaacatcaagcaagagtttatgtacaagctgctcctgagtgggtagaacat
atcaatgacacagaaagggatataggcagtgacctgtactggccttgtgtagctacgggc
aaacctattccatcaattaggtggctgaagaatggtgcctcgttccggaaaggtgaacta
agaatgcaaagtctgacctttgacgatgccggcatgtaccagtgcatagcagaaaacatg
cacggaattatttacgcaaatgctgaactgaagattgtggcttcacctcctacttttgaa
ctgaaccctatgaagaagaaaatcctagcagctaaaggaggccgtgtaatcattgaatgc
aagcccaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgcttgta
aatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatgtcacaaag
ctggatgaaggtcgctacacttgttttgcagaaaataaccgaggaaaagccaatagtact
ggtgttctagaaatgacagaagctacaaggattactttagctccattgaatgttgatgtc
accgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagacctg
acatttatttggtctctaaatggctttgtaatagattttgagaaagaacacgaacattat
gaacggaatgttatgattaaatccaatggtgagctgctgattaaaaacgttcagctgcgg
catgcagggaggtacatgtgcactgctcagactattgtggacaactcctcagcttcagct
gaccttgtggtaagaggtcctccaggcccccctggaggtataagagtagaagaaattaga
gacactgctgtagcacttacctggagtcgtggaacagacaatcatagtcctatttctaaa
tacacgatccagtcaaaaacctttctttctgaagagtggaaagatgccaaaacagaccca
tcagatattgaaggaaatatggaatctgctacagtgattgatttaattccatggatggaa
tatgaattccggataattgcaacaaacactctggggacaggagaacctagtatgccatca
cagaggattagaactgaaggcgctcctcctaatgtggctccttctgatgttggaggaggg
ggtggaagcaatcgagaactgacaataacatggatgcctttgtcaagagaataccactat
ggcaataactttggttatatagtggccttcaagccatttggtgagaaagaatggagaaga
gttacagttactaatcctgaaattggccgatatgtccacaaggatgaatcaatgccacct
tcaactcagtatcaagtaaaagtgaaagcatttaacaacaaaggggatgggccattcagt
ctcactgctgtcatttattcagcacaagacgctccaactgaagtacctacagatgtgagc
gtaaaagttttgtcatcttctgaaatgtctgtttcttggcaccatgtttctgataaatct
gtggaaggatatcagattcgttactgggctgctcatgataaagaagcagctgcacagcgg
gtacaggtgagcaatcaagagtattcaaccaaactggaaaacctgaagcctaacactcgc
taccatgtagatgtgtctgccttcaatagtgcaggctatggacctcccagcagcaccatt
gatgttgttaccaggaaagcacctccaagccagcgtccaagaattatcagttctgtaaga
tctggttcaaggtacatcatcacctgggatcatgtgaaggcaatgtcaaacgagtctgct
gttgaaggatacaaagtactttataggccagatggacagcatgaaggcaagttgttttcc
actggaaagcacacaatagaggtcccagtccccagcgatggtgaatatgttgttgaggtg
cgagcacacagtgaaggaggtgatggagaagtagcccaaataaaaatttcaggtgccgct
gttggagtaccaactctgctcctggtcctagtggtgcctgccctgggtgttcttgcctgc
tcgggattctga
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integrated database retrieval system
