Pseudopodoces humilis (Tibetan ground-tit): 102105169
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Entry
102105169 CDS
T02921
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102105169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102105169
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102105169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
102105169
NCBI-ProteinID:
XP_005517212
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MSSPDAGYASSDDQVQGRCSLPIMMPAVCPWAESLSPLGEAKAKGGSAPSGGRSKGEARI
RRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRVQH
MQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAAAAGPGLGSEVAGGGGGRMCVEGL
GLAYGEQGYAAAAGAGHYRECPPLGAAFDGYSLPTPDPSPLDAAESEAPFFAAGLQEECA
LMPYGYGPHPAAAEYPAAASESPSGAALRRHLPPGEALGAGGSLQALLGCPAPLHAYYGQ
CQPPGPGRGPPPLPPPGAVGQPSPPPETAPCREQLEQLPPEELLGEVDRTEFEQYLRFAC
KPELGLSFGGHDAAALSSPEGAAPISSAVSDASSAVYYCGYPDL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggtgcaggggcggtgctcg
ctgcccatcatgatgccggccgtgtgcccgtgggcagagtcgctgagcccgctgggcgag
gcgaaggcgaagggcggctcggcgccgtcgggcggccggagcaagggcgaggcgcggatc
cggcgtcccatgaacgctttcatggtgtgggcgaaggacgagcgcaagcggctggcgcag
cagaacccggacctgcacaacgccgagctcagcaagatgctgggtaaatcgtggaaggcg
ctgtcgctggcggagaagcgtccgttcgtggaggaggcggagcggctgcgggtgcagcac
atgcaggaccaccccaactacaagtaccggccgcggcggcggaagcaggtgaagcgcctg
aagcgggtggagagcggcttcctgcagcacggcctggccgaggcggcggcggcggcgggg
cccgggctgggcagcgaggtggccggcggcggcggcggcaggatgtgcgtggagggcctg
ggactggcgtacggcgagcagggctacgcggcggcggcgggcgcgggccactaccgggag
tgcccgccgctgggcgccgcgttcgacggctacagcctgccgacgccggacccgtcgccg
ctggacgcggcggagagcgaggcgcccttcttcgcggcggggctgcaggaggagtgcgcg
ctgatgccctacggctacggcccgcacccggcggccgccgagtacccggcggcggcgtcc
gagagcccgtcgggcgcggcgctgcggcggcacctgccgcccggggaggcgctgggcgcg
ggcgggtcgctgcaggcgctgctgggctgcccggcaccgctgcacgcgtactacgggcag
tgccagccgccgggcccggggcgcggcccgccgccgctgccgccgccgggggccgtgggg
cagccgtcgccgccgcccgagacggcgccgtgccgggagcagctggagcagctgccgccg
gaggagctgctgggcgaggtggaccgcaccgagttcgaacagtacctgcgcttcgcctgc
aagcccgagctggggctgtccttcggcggccacgacgcggccgcgctgtcgtcgcccgag
ggcgcggctcccatctcgtcggccgtgtcggacgccagcagcgccgtctactactgcggc
taccccgacttgtga
DBGET
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