Pseudopodoces humilis (Tibetan ground-tit): 102105197
Help
Entry
102105197 CDS
T02921
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102105197 (DCHS1)
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Cadherin related
102105197 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
PepSY
Cadherin_4
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
102105197
NCBI-ProteinID:
XP_005526661
LinkDB
All DBs
Position
Unknown
AA seq
3266 aa
AA seq
DB search
MEQMKRSTVLLLELLILGGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY
MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI
NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR
RGPNGVLYLDLVVSSVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN
QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPEQYFTIDARTGVIKL
NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS
EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD
SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA
RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT
PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY
SIGSGIGSIVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL
EDMNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL
NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFDQAQY
FFIVPEDMPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE
SQPVLILDVQARSGSPPAYSNTRVKISVSDVNDNVPAFPAPSDSILLPEATEPGTTVYTV
QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQYEAISAYSLAIVARDSGIP
QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPISTRFLQVRALAHDVESTALTYHL
RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGTVADTRKTGTSTVRIS
VTDENDNSPRLSEERYFFTVSENQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH
TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG
QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL
RRTDRAEYIFTVTASDRGVVPHSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV
IGSVAPPDAPVQGQLIYTVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDT
QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS
QVRYALLHLEPPGAPFQLDSRSGQLTLRQGLDREAAASFLLVVEATDQARNVSQRRSTAV
TARVFVTDENDNVPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNGD
GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSTTQLLSVLVLDVNDEAPAF
EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL
DREEQEQHVLTVYAQDAGLPPSLTKATVWITVGDENDHAPHLESESCSVEVPENQSRVAL
YTLRATDPDGGENGRLEYRLAGGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD
HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ
VSYYLGNESLGMFQVEPQSGCIRSAQALDRERQPTYSFLAKAVDSAPWEPKSTAVRVTVV
VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN
SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTSD
VALAENAAPGTAVASVQAMHMGGSSGHITYSIISGNERNTFMIQPSSGAISVQDSSSLDF
EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL
ADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT
PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPSLSYTLL
LEGDAADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV
PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPNNGTVFT
TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL
RPGTTVLTLEAGDADLSRENAGFDYTIVSGNSGNAFQVESRVAWAGGQLRTQGALVLVES
LDFEAIPVYNLTVAASDRGLPQRSATVPVLISVQDVNDNPPVFTRAEYRAAVSEATLPGT
ELLRVAAHDADSGPRGHVHYTISSGDQQGLFQLHESTGALSLVQPLDREAQALHTLVVRA
TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG
ELRYVVLEQAVGDPTTGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVQATDAGNASA
TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQTIGRVLATDEDEGADGVVLYTLAKP
SPYFAINQTTGSIYLRVDSQPQAGAGRAKREPREMSLEVQARSPLPASRVASAQVTIDVT
HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRQGHKKAEGEGALARAQSG
SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR
MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL
LPGPSLQLYREDGGSSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG
SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH
PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG
ISQGPSTSTISAEHSLEPPEEAELRI
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatgaagaggtcaacagtgcttctgctggagctgctcattcttgggggcctg
agagcagggatgggctctgctgtcctgggcaccctggatcttcaaatagatgaggagcag
ccagctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac
atgtatttcatctcagcacaggagggcagcggtgtctccactgacttggggatagatgag
aatactgggatcatcaaaacagctcgtgtcctggatcgggagactcgggaccgctacagc
ttcattgctgtcaccccggagggcatcacggtagaagtgaacatccaagtgaatgacatc
aatgaccatgccccagcatttcccaaacagcacagcacctttcagatcccagagcacaca
cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggcctcctgaac
acgcaaggctatatgattaagggtgggaacgtggggcaggccttccgcctggaaacgcgc
cgaggacccaatggggtcctgtatttggacctggtggtcagcagtgttctggatcgggag
aaccgttcatcatactcactgctgctggaagcctacgatggtggttctcctccccggagc
acccagatgacactggatgtgtccattcaggacatcaatgacaacgcccccagcttcaac
cagagccgctatcatacactcatttcagagaatctgaaacctggcagcagcatcctgcag
gtctttgcctctgacgcagacgaaggtgacaatggggatgtgatttatgagatcaaccga
cggcagagcgatcctgagcagtacttcaccattgatgcccggactggagtcatcaagctc
aacaagggtctggattatgaagtgaggaaggtgcatgagctggtggtgcaggcaagggat
aaggctgtccatcctgaagtcaccacggcctttgtcactatccatgtgcgtgactacaat
gacaaccagcccactatgactatcatctttctgagtgaagatggctccccacagatctct
gaaggagcccagcctggacagtatgtggcacggatttctgtttccgacccagactacggg
gagtactccaatgtcaacgtcacactggagggaggagatggcaagtttgccctcactacc
aaggacaacatcatctatctgatctgtgtggaccagcttctggatcgggaagaaagagac
tcctatgatctgcgggtgacagctactgactcaggaacaccgccactccgggcagaatca
gcctttgtgctgcaggtgatggatgtaaatgacaatcccccgctctttgaccagcaggag
tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct
cgtgacaaggaccagggtcccaatggggaggtgcggtacagcattctgcacggccgtgac
acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca
ctggattatgagaaggacccacagcctcagctcactgtgctggctacagaccggggaacc
cctgccctgtcttcctcagctgtggtgcacgtggccttgcaggatgtcaatgacaatgag
ccagtgttcagaagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc
tgcttcttgcaagtgacagccacagatgcagacagtggtgcatttggctccctttcctac
tccattggctctggcatcggcagcattgtccccacacagttcagcattgacaagcactcg
gggcagctgtgcacggtgcagcccctggaccgtgatgagggcacatctgcctacgacttc
accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaggtgttcctg
gaggacatgaatgacaaccggccagtgttttacccgctggagtacgctgccagcatcagc
acacagagcatgccagggacagccgtgctgcgtgtcaccgcccatgacaaggatgagggg
ctgaatgggagagtgacgtaccgcatcgtcctgggaaactcgcccccgctcttctccctc
aacaaggacacaggtgtcatctctttgtcatggtctctgagtggcaaagccaacaccttg
gtgcagctggtgatctctgctcaggatggggggggcctgcaggcacagccgaatgcccgg
gtgaacatcagcatcgtggagggcacagtctcaccccctgtcttcgaccaagctcagtat
ttcttcattgtgcctgaggacatgccacagggtgccagcgtcggggctgtccaggcccag
aacccaccaggtcatgctgatgacatcttctattccatctcctcgggggaccctcatggc
tatttctccattgactcagcctcggggcagctccgcaccagcctgcctctggatcacgag
tcccagccagttctcatcctggatgtccaggccaggagcggttcaccccctgcctatagc
aacacacgtgtgaagatctccgtatcagacgtgaatgataacgtgccagcattcccagct
ccctctgactccatcttgctgccagaggccacagaacctgggactacagtctacaccgtg
caggccgaggaccgtgacagtggtgccaatggacaggtgacctttgagctggtgtcaggg
ggtgagggcacctttgtcgtggagcgtgcctcaggggcagtgcggctcctcggggccctg
cagtacgaggccatctcagcctacagcctggccatcgtggcccgggacagtggcatcccc
cagctcagctccaccttcacgctcctggtgcatgtgcaagccgaggacgacaacggaccc
atctttgacactctcacctaccgtgtggaggtgcaggagggtgttcccatctccacccgc
ttcctccaggtgagggccctggcacatgatgtggaatccacggcccttacctaccatctc
cgtgcagacggggacgctgccagcttcggcatcgtgcctgagagcggctggctgtacgtc
aagagtgccctggaccgggagacacgggacttgtatgtgctgacagtgctggcctcagtg
ggaggcaccgggactgtggcagacacacggaaaactggcaccagcacggtgcggatcagc
gtcaccgatgagaacgacaacagccctcggctgagcgaggagcgctacttcttcaccgtg
tctgagaatcaggctcctggcagcagtgtgggaagggtgatggcaagcgaccgggacgcc
gggcagaacagccggctcacctatcgcctgctccagcatgatcccaactttcttatccac
acacagacaggagaggtcagcaccaagcacagtttggatcgggagcagcagtccagtttc
cagctcctggtgattgtgcaggatgggggagcgccgccccgcagtgccaccggaaccatc
tatgtcactgtgctggatgagaatgacaacgctcctgctttcctccacgtgggcagtggt
caggagctaactgtgcaggtgctggaagagaagccatcgggactcctagtcgcctccctg
caggccaaggaccctgacgagggggagaatgggaccatcatctactcactgataggagcc
tgggcagagcgtttcactctgcatgtggctactggagagctgcggacagccacagttctg
cgccggactgaccgtgccgagtacatcttcaccgtgacagccagcgaccgcggcgtggtg
cctcacagcacatcagccatcgttcgtgtccaggtgttgccatcctcccgtgtgctgcca
cggcctgatgccactgtgttgaccctgcatcctctcgagggggtcaagccagggtctgtg
attggttcagtggcccccccggatgcccctgtgcaaggacaactgatctacacggtggta
ggaggtggtggggacggcacctttgtggttgatagcatgacaggggagatttatgctgcc
cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgctgaggacacg
cagcacggctatccctccagcaggttggtgctggtccagatccacgtgcaggactgcaat
gaccaggcacccaccttccctgaagaccccattactattgtggtgcctgagaatgcccag
gctggctcctccatcttcaccttccaggcactggatggggatggagtgggccccaacagt
caggtgcgctatgctctgctgcacctggagccaccgggagcccccttccagctcgacagc
cgctcggggcagctgaccctgcgccagggcctcgaccgggaggctgctgcctccttcctg
ctggtggtggaggccacagaccaggcccgcaacgtcagccagcgccgctcgactgccgtc
acagcccgagtgtttgtgactgacgagaacgacaatgtgcccgtcttcctctccccggcc
accgtcagcgtcatggaggaccagcccacaggctttgtggcactgcacgtggtggcccag
gacagcgacctgggagagaacggacgtgtgagctactccttgcgagcaggcaacggtgat
ggccgcttccacctcaaccccagcactggcgccctctccatcgtgcgggccctgaaccgg
gaggaggtggcacagcacaacctgacggtggtggccacggaccacggcttcccacgcctc
tccaccacacagctgctgtctgtgctggtgctggatgtcaacgatgaggctcctgccttt
gagaaacctgaatatgaagcccacatcatggagaacctgccggctggcagcccagtgctg
caggtgctggccacagaccgggatctgggtgccaatgggcaggtgtcttatgggggtctc
tctggggggccgttctccatccacccacagacagggctcattgtcaccacgcgccccctg
gaccgggaggagcaggagcagcatgtgctgacagtctatgcgcaggacgctggcctgcca
cccagcctcaccaaggccacggtgtggatcacagtgggggatgagaatgaccatgcaccc
cacctggagagcgagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc
tacaccctgcgggccactgatcctgatggtggggagaatggacgcttggaataccgtctg
gcaggtggagaccctgggcaggatttcagcctagaccccgtctctggtgttctctccact
gcacatgcccttgaccgtgaacaaattgcttcttacagcctcattgtagtggtgcaggac
cacggctccccaccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat
gacaatgcacccagttttgctcaggccagctacacagtggaggtgccagaggacttgcca
gtcggtgccctggtgctgcagctggtggctgaagacccagatgagggcaccaatgggcag
gtctcatattacctgggcaatgagtcgctgggcatgttccaggtggagccacagagtgga
tgcatccggagcgcccaggcactggaccgggagcgacagcccacctacagcttcctggcc
aaggcggtggactcggcaccatgggagcccaagagcacagctgtgcgtgtcactgtcgtg
gtgcgagatgtcaatgaccatgttccggccttcctgcacagcccactcaccgtcaacctg
tcccgccacacgccgctcaagcaggtggtggccaccatgagggccgaggacagggacgcg
ggtgccaatgcctccatcctgtaccgctttgccacccccagctccgccttcgcaatcaac
tcctacacgggggacatccagctgctgcagccccttggctcactcagccagcgccagcgg
acactctttgtgctggccatggacctggggcagccagcgctctcttccacaggggtagtg
gtgatccatgtgcaggaggagccctaccgcggcctgcgctttccccgcagcaccagtgat
gtggccctggccgaaaatgctgccccaggcactgcggtggcgagtgtccaggccatgcac
atggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc
ttcatgatccagcccagctcaggtgccatctcagtgcaggactccagtagcctggacttt
gaggccagcccccggctgcgcctggtgatccaggcagagactgcggcttcctttggcttt
atggccataaacctcaacctccaggatgtgaatgacaacctgccccgcttccagctgcag
aactacgtggcattcatctgggagtcacagagctatgactctcctgtcatacaggtgctg
gcagatgacctggaccagggagtgaacgggcaagtgacttatgctatcaaccagtccctg
ccaatgccaggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc
ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca
ccaccgctcatgggctcggccacgctgactgtggtggtgatggacatcaatgacaatagc
cctaccatcccggtcccctgggagatccgtgtccctgagaacacactgctaggcacccag
atagcccagctgactgggaacgatgtggactcgggcccttcgctctcctacacgctgctg
ctggagggagacgcggcagacaccttcggggtgctgcgctatggtggccacattgccctg
acagggccactggaccatgaacagcgcagccgctacaccctcaccctgcgtgcctctgac
acacgccatgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaatgtg
cccacctttacccaggttttctatcaggtgctgctgccagagcacacacctgctggcagt
gtcatcctcactgtgagtgcaactgaccccgactcagggagcaatggggacatcaccttc
cacctggctgtgcccagccccgatgttgccatcgaccccaacaatgggaccgtcttcacc
acccggcaggtggagttcaatgccagccagcccaccctggatctggtggtggaggcgcgt
gaccatggctctcccagcctctcatcctgggccacagtacaactccaggttctggatgtt
aacgatcacagcccccgcttccaggagccatgctacaatgccagtgttcctgaggacctg
cgcccaggcaccactgtgctaacactggaggcgggtgacgctgacctctcccgggagaat
gctggctttgactacaccatcgtcagcgggaacagcggcaacgccttccaggtggagagc
cgggtggcctgggctgggggacagctccgcacgcagggagccctggtgcttgtggagtcc
ctggactttgaggccatcccggtgtacaacttgaccgtggcagcgtcagaccggggcctg
ccacagcgcagcgccaccgtgcccgtgctcatcagtgtgcaggacgtcaatgacaacccg
cccgtgttcacccgggccgagtatcgtgcagcggtgagcgaggccacgctgcctggcact
gagctgctgcgcgtggcagcccacgatgccgactcagggccacggggccacgttcactac
accatcagctcaggtgaccagcaggggctgttccagcttcatgagagcacaggggctctg
agcctggtgcagccactggatcgggaggcccaggcgctgcacacgctggtggtgcgggcc
acggacacaccaggtgggcactttgccctggtccctgtggccattgaggtgaaggacatc
aacgacaataagccgtacttcccagtggaggtgctgagcgccagcatccgggagaacttg
ccccccggcacgctggtcaccacactgcgtgctgtcgatgccgacaccggcgcctttggg
gagctgcggtacgtggtgctggagcaggcagtgggggaccccaccacgggggacggccgg
gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat
gagcgagccaaagccttccagctcctggttcaggccactgatgctggcaatgcctcggcc
actgtgactgtgcgggtgctggtgacaggggaagatgagtatgatcccatcttcctaagc
ccctccttcaacttcgaggtgcctgagggtgcacgcaaagggcagaccattgggcgggtg
ctggccacggacgaggatgagggggcagacggtgtcgtattgtacaccctggcaaagccc
tcaccctactttgccattaaccagaccacaggctccatctacctgcgtgtggacagccag
ccccaagctggggctgggcgtgccaagagggagccacgggagatgagcctggaggtgcag
gcacgcagccccctgcctgcttcccgtgtggcctctgcacaggtcaccattgacgtcacg
cacacctcctttggcctggcacccgacctcaacctactgctggtggctgtggccgcctcg
ctgggcgtcgtggtggtgctggctgccgtggccatcgtgctggcactggtacgttcccgg
cagcgtcagggccacaagaaggcagagggggagggggcactggcccgtgcacagagtggg
tccttgcagaagctgggccgtgaggagccagcgctgcccggggctgagcacatctaccac
caggcactgccagggtatgggaccgagccggcggggccctacactcggggcggctcactg
gacccctcgcattccagcggccgtggctctgctgaagctgctgaggatgatgagatacgg
atgatcaatgagtacccacgcgtggccagcatcacagcctccatgcaggagcacatcgct
gcccgtggccctgactctggcatccagcaggatgctgaccagctctccgacatctcctgt
gagccagctgcattggagagcgcccagtggttcaagagcaagaagggctctgggctgctg
ctgccagggccatccctgcagctgtaccgtgaggacggggggagcagcgccttcctgggc
gtccgctgcggcctcagtgtctcctctcagccccaggactacgccttcccagaggacggc
aagccctccgtggagggctcgctcaccgccattgtggccagcgatgaggagctccgcggc
agctacaactgggattacctgctgaactggtgtccccagttccagccactggccagtgtc
ttcacggagattgcccgcctcaaggatgagagctccctgcgcaagcccttcccagccaag
cccaaggcagagcccaagccccgcattgaccccccgcccctcatcacctcggtggcccat
ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcacccctcc
tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctccgccatgtcgccc
agcttctccccatcactgtccccgctggccgcccgctcccctgtggtctcgcccttcggc
atctcacaggggccatccacctccaccatcagtgctgagcactcactggagccccctgag
gaggccgagctcaggatttag
DBGET
integrated database retrieval system
