Pseudopodoces humilis (Tibetan ground-tit): 102105199
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Entry
102105199 CDS
T02921
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120
Ubiquitin mediated proteolysis
phi04137
Mitophagy - animal
phi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102105199 (PARK2)
04120 Ubiquitin mediated proteolysis
102105199 (PARK2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102105199 (PARK2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102105199 (PARK2)
04121 Ubiquitin system [BR:
phi04121
]
102105199 (PARK2)
03029 Mitochondrial biogenesis [BR:
phi03029
]
102105199 (PARK2)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102105199 (PARK2)
Membrane trafficking [BR:
phi04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102105199 (PARK2)
Aggrephagy
Other aggrephagy associated proteins
102105199 (PARK2)
Xenophagy
Other xenophagy associated proteins
102105199 (PARK2)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102105199 (PARK2)
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102105199 (PARK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
102105199
NCBI-ProteinID:
XP_005527008
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MTVFVRFNSSHGFPVEVGSDSSILQLKEAVAQRQGVPADQLRVIFAGRELSNDLTLQNCD
LAQQSIVHIVQSPQKNSHNKEETEDSCVGGVLKALKREPESLTRIDLSKSILPSVSAGLA
VILDPGKNSVSLPSEKSGAASYNSFYVFCKNFCQAVKPGKLRVRCSVCKQGTLTLARGPS
CWDDVLIPNRIGGVCQSRGCNGNIAEFYFKCGAHPTADSETSVALNLITTNSRCITCITC
TDIRSPVLVFQCVHRHVICLDCFHLYCVTMLNDRQFIHDPELGYSLPCVAGCPDSLIKEL
HHFRILGEEQYNRYQRYGAEECVLQMGGVLCPTPGCGAGLLPEPGLRRIVCQPGNGIGCG
FVFCRECKEEFHEGECNSLLSPQGAMAQKRYVVDEHAAMQARWEEASRETIKKTTKPCPN
CNIPVEKNGGCMHMKCPRPQCRFEWCWNCGLEWNRTCMGDHWFD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtttgtcaggttcaactccagccatggcttccccgtggaggttggttcggat
tccagcatcctccagctgaaggaggcagttgcccagcgacagggagttccagctgaccag
ctgcgggtgatttttgcagggagggagctcagcaatgacttgacactgcagaactgtgac
ctggcccagcagagcattgttcatatcgttcagagtccacagaagaacagtcataacaag
gaggaaacagaagatagctgtgttggaggtgttctaaaagccttgaaaagggaacctgag
agtttaactcgcatagatctcagtaaaagcatcctcccttcagtctctgcagggttggca
gttattctggatcctggaaaaaacagtgtttcacttccctctgaaaaatcaggtgcagca
agttacaacagtttttatgttttttgcaaaaatttctgccaagctgtgaagcctggaaaa
ctgagggtccgctgcagtgtgtgtaaacaaggaacactgacattggcaaggggcccatct
tgctgggatgacgtgctaattcccaacagaataggaggagtttgccagtcccgaggttgc
aatggaaacatagcggagttttactttaaatgtggagcacacccaactgctgacagtgaa
acatctgtggctttgaacctcattacaacaaacagccgctgtatcacatgtataacatgc
acagatatcaggagtcctgtgcttgtgtttcaatgtgtacatcgccatgtcatttgcctg
gactgcttccatttgtactgtgtgaccatgctgaatgaccgccagttcatccacgacccg
gagcttggctattccctcccctgtgtagctggctgtccagattccttgattaaagaactt
catcacttcaggattctgggagaagaacagtacaaccgctaccagcgctatggggccgag
gaatgtgtgctgcagatgggaggagtgctgtgtcccacccctggctgtggggcaggtctg
cttcctgagccagggctgaggagaatcgtgtgtcaaccaggcaacggaataggctgtggg
ttcgtgttctgccgtgaatgtaaagaagaattccatgaaggggaatgcaactctctcctc
agcccacagggagccatggcccagaagcggtatgtggttgatgagcacgcagccatgcaa
gctcgatgggaagaagcctctagagaaacaatcaagaagacaaccaagccatgccccaac
tgcaatattccagtagaaaaaaatggtggctgtatgcacatgaaatgccctcgccctcag
tgcagatttgagtggtgctggaactgtggcctggagtggaacagaacctgcatgggagat
cactggtttgactag
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