Pseudopodoces humilis (Tibetan ground-tit): 102105239
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Entry
102105239 CDS
T02921
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phi03016
]
102105239 (TRUB1)
Enzymes [BR:
phi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102105239 (TRUB1)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102105239 (TRUB1)
Prokaryotic type
102105239 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102105239
NCBI-ProteinID:
XP_005520944
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEHAL
QEDKWTIDEIARSLEHCTALLLGEPAWKKLKTEHPGETAVICGDELGQGKRLND
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagcggctgctggcagaagctggtgtgcaaacaaacgggaacaaaagaaatcag
gttttgaaaattggacatggtggaactttggacagtgcagccacaggagttctggttgtt
ggtattggaaaaggaacaaaaatgctgggaactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaagtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaaacctgctcggccagtgagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctggatgttgaatgtggt
ggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacctgtgcc
acagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggaacacgccctg
caggaagacaagtggacaattgatgaaattgctcggtccttggagcactgcacagccctg
ctcctgggagaaccagcttggaaaaaactgaagacagagcatcctggtgaaactgctgtg
atctgtggggatgagttgggtcaaggaaaaagactgaatgattga
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