Pseudopodoces humilis (Tibetan ground-tit): 102105291
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Entry
102105291 CDS
T02921
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105291 (PDZRN4)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105291 (PDZRN4)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102105291 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Sina_ZnF
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
102105291
NCBI-ProteinID:
XP_005519339
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGFDPSRFAGPVAAELQCGLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCRPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPEHLAACRFGPAGPTEPQPRAGL
PSGSSAGQPRAGGGQRCLRALRGGGGGGPEPGHELKREAQRWSRREKSLLAQLSALQSEV
QLTARRYQAKFGQYMSHISSIARDLAGSQAGKGGERKPLMIMLHRENDTLGFNIVGGRPN
QKNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKATHEEAVEAFRNAKEP
IVVQVLRRAPATKAHSSSQDVRFMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSD
SCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDDEE
DTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVARP
EMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSS
NNHEKDSGVGPTDESLRNDESSEQENATEEHNSVTLQSKRNLGHSQDTLGSVELQCNESF
VSGEYIESDFIRNPEEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRREQDGVEHEL
QLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDESFRNYNTSTDLQRGKLDDIME
HPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRVISITNRKNLRTTIVANQSSSGQS
NRETTSAKTKPAEQNSAAENAVLASDSSKFTDQERQGSEHIPYLSPYHSSSYRYGNIPAH
AKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCVEPKMEWKVKIRSDGTRYITKRPV
RDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRS
RLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRV
HNAFLSVTTV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccttcgcggttcgcggggccggtggcggcggagctgcagtgcgggctg
tgcgggcgggtgctggaggagccgctgtccactccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcgccgccgctgcccgctgcgctgccggccgctggcg
gccgccgagctgcgccccgtcctgcccctccgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgaggggctgcggccgcaccgtgcggctgcgggagctgcccgagcac
ctggcggcgtgccgcttcgggccggccggccccaccgagccgcagccccgggccgggctc
ccctcgggcagctcggcggggcagccgcgggcgggcggcgggcagcgctgcctgcgggcg
ctgcggggcggcggcggcggcggcccggagccgggtcacgagctgaagagggaggcccag
cgctggagcaggagggagaagtcgctgctggcgcagctgtcggcgctgcagagcgaggtg
cagctgacggcgcggcggtaccaggcgaagttcggccagtacatgagccacatcagcagc
atcgcccgggacctggcgggcagccaggccggcaaggggggagaacgcaaaccattaatg
atcatgctacaccgagaaaatgatactttgggattcaatattgtgggaggacgacccaat
cagaagaatcaggaggagtctgctgagggaatttatgtgtcaaagattttggaaaatgga
cctgcagacaaagcagaaggcctgcaaattcatgacaagattattgaggtcaacgggaag
gacctctccaaggccactcatgaagaagcagtggaagctttccgcaatgccaaggagccc
attgtagttcaggttttacgacgagccccagctaccaaagctcacagcagctctcaggat
gttcgctttatggatgccagcactcagactgacatcacttttgagcatattatggctctg
gccaagctaaggccctccacaccaccagttcctgatatctgcccttttctactttcagat
agctgccattctcttcacccggtggagcatgaattttatgaaggtaatgagtatctttcc
agcctgcctgctgatgcagatagagcagaggactttgagtatgaggaggtggagctgtgc
cgcattggcagccaggagaagctggggctgactgtctgttacagaactgatgatgaggag
gacacggggatctatgtcagtgaggttgatccaaatagcattgctgccagagatggacgg
atccgtgaaggagaccgcattttgcaaataaatggccaagatgtccagaacagggaagag
gcagtggcgttgctctccagtgaagaatgcaggaaaattgtgttgctggtggcgaggcca
gagatgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagaggagtta
aacttggaaatgttggaagagcaacataatgaagcgatgcagtacacagccaatgaggtg
gagcagccaaagaaacatgaagaggaagatggcactacagatactgcaacttcatcatcc
aataatcatgagaaggacagtggggtgggacctacagatgaaagtcttcgaaatgatgag
agctcagagcaagaaaatgcaaccgaggagcacaacagtgttaccctgcagagcaaacgg
aatttgggccacagccaggatacattaggcagtgttgagctccagtgcaatgaaagcttt
gtgtctggggaatacattgaatctgatttcataaggaacccagaggaggaatgtgaaagg
tttcggcagctgttggaactgaagtgcaagattcggaaccatggggagtatgatctttat
tactcaagcagcatgatagaatgcaacagaagagagcaagatggagtggagcatgagctg
cagctacttaacgaggaactgaggaacattgaactcgaatgtcagaatattatgcaagct
caccggctccaaaaggtgagagatcagtacggagacatttgggctttacatgatgaaagt
ttcaggaattataacaccagcacagacttacaaagaggcaaactggatgatatcatggag
caccctgagaagtctgacaaggacagctccagtgcctacaacactgctgaaagctgcagg
agcactccactgacggtggagcggtcccctgataactctctccagagggtgatcagcata
accaacaggaaaaacctgaggaccacaattgttgctaatcagtcatcctcaggacagagc
aacagggagacaacctcagccaaaaccaaacccgctgagcaaaacagtgctgctgagaac
gcagtgctggcatcagatagcagcaaattcacagaccaggaaaggcaaggcagcgagcac
attccctatttgtctccatatcacagctcttcctacaggtacgggaacatacctgctcac
gcaaagcactatcaaagctacatgcagctgatccagcagaagtctgctgtggagtacgcc
caaagccagctcagcctggtgagcatgtgcaaagactcgcagaagtgtgtggagcccaag
atggaatggaaagtgaaaataaggagtgatgggacgaggtacatcacaaaaagaccggtt
agagacagaatcctgaaggaacgtgccttaaaaattaaagaggaacgcagcgggatgacg
acagatgatgataccatgagtgagatgaagatgggtcgctactggagcaaagaagagcgg
aagcagcatttggtgcgagctaaggagcagaggaggcggcgggagttcatgatgaggagc
aggctggagtgtcttaaggaaagtccacagagtggcagcgagggcaaaaaagaaatcaac
attattgaactgagtcacaaaaagatgatgaaaaagagaaacaagaaaatcttggacaac
tggatgacaatacaagaactgatgacacatggtgctaaatccccagatggcacaagagtg
cacaatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
