Pseudopodoces humilis (Tibetan ground-tit): 102105301
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Entry
102105301 CDS
T02921
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105301 (RBBP6)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105301 (RBBP6)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
U-box type E3
102105301 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
102105301
NCBI-ProteinID:
XP_005523160
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVISRSEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQLPPPPPPPPPPPLMRQ
TITRTLQPLMRPALARQQDPLMIPLASLASRSALSSLGPGPSMAAGLPVNPSSVVVSDLP
PAVSLSLREKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLLEEKGYQVPVLRQPAIP
SLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPSLPASAPVFVPVPP
PPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPANMSSAWVPTAVP
AAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRR
SFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYQRRGKGKS
RNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGEAEREYFNRYREV
PPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQPRPPVNRENFSPE
RFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRESHGIKDPTKSKEKEVE
NPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPTEDAKTDSLFMLPSRDD
ATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIEKTKRKVEVAAAPKKDNVAKPAKASQ
EKVDPDREKSPRTEPPVKKAKEELPKTDSVKASSSQKDEKALGTPRKAHPKVAKDHPETR
PAKEEKAKKEHPKEAKAEKPSSKEEKSKKPAEKSKLSDAKLEKRKRKAEEKADKEHEATS
AKASKPESVELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKLNRETGKKIVSGEN
VPPGKEAVEKPEPSSSKVKAEKAKGKARRKVAAADGASSTLVDYTSTSSTGGSPVRKPEE
KPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTTQVPPAVG
KPTSVIKPVSAKAPNPLKHIEKETEPLEKAQKAAKEASYESTQHDAKSSKSSLSSEKGKT
KDRDHSLSDKDSSEKRKSSVQPEKEHSERAAEQGNGKTVSQSSKDGRSSEKHDSGRGSAA
KDFTPNRDKKSDHDGSREHSKRRDEKSESARRKDSPSRIRDSTAAQKSKPREERVEPPKK
GPAEAKRSSYSPPRERKAAEHKAVHDPKRPAEEHKPPDKNPGKEKEKEKEKEKHVPEVKS
NKEKEPAGNKAPVKQDSPEVKVEKENVAGQGDKGAAKPKAPVSSAARLSSDLTRETDEAA
FVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVEKLKEEVAAPAPAEQPEVGRSQSQSS
PSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHMGNET
ELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacagtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agcgctctgattcccaagaactcatcagtgattgtgaggagaatccccattggaggagtt
aaagctaccagcaaaacatacgttataagtcgaagtgagccagtgagtggaacatcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttactaagactgccaatctg
gctgaagccaatgcttccgaggaggataaaataaaagctatgatgacacagtctggccat
gaatatgatccagtcaattacatgaagaaacctgtggggccacctccaccctcgtacacc
tgttttcgctgtggcaaacctgggcactacataaagaactgtccgacaaatggggacaaa
aatttcgagtctgttcccagaattaaaaaaagcacaggaattccaagaagttttatgatg
gaagtgaaggaccccaacacgaagggtgccatgctgaccaacactgggaaatacgcaatc
ccaaccatagatgcggaagcttatgctataggaaagaaggaaaagcctcccttcctacct
gaggagccatcctcctcctcagaagaagatgatcctattccagatgagctgttgtgtctc
atttgtaaggatataatgactgatgcggttgttattccctgctgtggaaacagttactgt
gatgaatgtattagaactgcgctgctggagtctgaggaacacacctgccctacctgccat
cagacagatgtttctcctgatgctttaatcgccaacaagtttctgcgccaggctgtcaac
aacttcaaaaatgaaactggctacacaaaaaggctccgtaagattcagcagcagcaacag
cagcagcagcagctgccaccaccaccgccgcccccgccgccgccgcccctgatgcggcaa
acgataacgcgcaccctgcagccgctgatgcggccggccctggcccggcagcaggaccca
ctcatgatcccgctggcctccctggcttcccgctccgccctctcgtccctgggccccggg
ccgtccatggcagccgggctgcccgtcaatccgtcttctgtggttgtttctgatctccct
ccagcagtgtccctctctctccgtgaaaagccggacggaccttttcgtgatgccgatgct
gttttgcctcctgctctgatgactgctgctgagctttccaaatcttcccctttgtcaatc
agcagtttgctggaagagaagggctatcaggttcctgtactgagacaaccagccatacca
agtcttctgggccctcaaggacaatcaatacccacaactggtcatccaatgagagctggt
gcacttcgcaggccaggctgggaactttcaaatcgaggacgcccgcacagtgaccgtgcc
caaaggactcaggccccatcactgccagcatcagcaccagtctttgtgcctgtgcctcca
cctcccttgtatcctccaccaccccatgctcttcctcttcctccgggggtaccaccacca
cagtttcctcctcagtttccacctgggcagcctccatccgctgggtacactgtcccccct
cccggatatcccccagctcctgcaaacatgtcatcagcttgggtcccaacagcagtgcca
gcggctcattcaaacaccatcccaacgacacaagcacctcctctctctagggaggagttt
tacagagagcaacggaggcttaaagaggaggaaaagaaaaagtccaaacttgatgagttt
acaaatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgt
tcgttttccaggtccaagtctccctatagtgcttcatcttactctagaagctcgtacacc
tactccaagtcccgctcaggttcgtcgcgctcccgctcctactcgcgctcctttagccgc
tcccactcccgctcctactcccggtcgccaccgtatcagagacgaggcaaagggaagagt
cggaactaccgctcgcggtcccgctcccacggctatcaccgctcccgctcccgctcgccc
ccgtacaggcgctaccactcccgctccaggtccccggtgttccggggccagtcccccacc
aaacggacggtcccgcagggcgaggccgagcgcgagtacttcaaccgctacagagaggtg
cccccatacgacatgaaggcttactatggccgctcggtggacttcagagacccctttgag
aaggagagatacagagagtgggagaggaactacagagagtggtacgagaagttttacaag
ggctatgccgtgggtgctcagccacggcctccggtgaacagagagaacttctctccagaa
aggtttggcccgcctgggaccagacgagagaattcaccgtatgctcggggacggagggag
gagtatcccgctgggcagagccacaggaatcgtaatgtagctggaaactaccctgagaag
cctgggagagagagccatggcatcaaagatcctacaaaatcaaaagagaaggaggtggaa
aatccactgggagatggcaaaggcaataaacataaaaaacaccggaagagaagaaaaggg
gatgagaatgaaggatttcccaatgttgagctgttagaaggagcaagaaaaccaagagag
ccagtcccaacagaagatgctaaaacagactctctgttcatgctgccgagcagggatgat
gccacccctgtaagggacgagcccatggaagcagattccattgctttcaaaccagtgtct
gaaaaggaaaagaaagagaaggataagccaaaagcaaagattgagaaaacaaagcggaag
gtagaagtggcagctgctccgaagaaagacaacgtagcaaagccagctaaagcttcccag
gaaaaggtggaccctgatcgtgaaaaatctcctcgaacagaacctcctgtgaaaaaagcc
aaggaagagctgccaaagacagacagtgttaaagcctcttcctctcagaaggatgagaag
gctcttggtacaccacggaaggctcatcccaaagtggcaaaggatcacccagaaaccaga
ccagccaaggaggagaaggcaaaaaaagaacatcctaaagaagccaaggcagagaagccc
tccagcaaggaggagaagtcaaagaaacctgctgagaaaagtaagctttctgatgccaaa
cttgagaaaaggaaaagaaaagcagaggaaaaggctgataaagaacacgaagccacttct
gcaaaggcctctaaacccgaaagtgtagaattgaaaacatcgcccaaggggaaggctgag
cccgagggggagaaaggagagcggacaccagaaaaggataaagctgcttttcttaacaac
ccgtccaaaaagattaaacttaaccgtgaaactggaaaaaagattgtgagcggggaaaac
gtgccacctggaaaagaagctgtggagaaacctgagcccagcagcagcaaagttaaagca
gaaaaggcaaagggaaaagcaaggaggaaagtggcagcagctgatggtgctagctcgact
cttgtggattacaccagcacgagttccactgggggaagccctgtcaggaagcctgaggag
aagccagacaccaaacgaactgtcattaagaccctggaggagtataacaacgacataaca
gcccctgctgaggatgtcattatcatgatccaggtccctcagtccaagtgggataaagat
gactttgagtctgaagaggaagatgtgaaatccaccacccaggtgcccccagctgtagga
aaacccaccagtgttatcaaacctgtgagtgcaaaggcaccaaaccccctcaaacacatt
gaaaaagagacagagcctctggagaaagcacagaaagctgcaaaagaggcgagttatgaa
agcacccaacacgatgccaagagttcaaaaagttccttgtcaagtgaaaaaggtaaaacc
aaagaccgggatcattctttgtcagacaaggacagttctgagaagaggaagagcagtgtt
cagccagagaaagagcactcagaacgtgcagctgaacaaggaaatggaaaaactgtatct
caatcttccaaagatggcagatcttcagagaagcacgatagtggccgtggctccgctgcg
aaggacttcactcccaaccgagacaagaagtctgaccacgatggcagcagggagcattcc
aagcgcagggatgagaagagtgaatcagcacggaggaaagactccccatcccggatcaga
gactccacggcagcgcagaagagcaaaccaagagaggagcgtgtggagccgcccaagaag
ggccctgcggaggccaagaggagcagctacagccccccacgggagcgcaaagccgccgag
cacaaagccgtgcacgaccccaagcgccccgctgaggaacacaaacccccggataaaaac
ccgggcaaggagaaggagaaagagaaggagaaggagaagcatgtaccagaagtcaagagc
aataaggagaaagagccagctgggaataaagcaccagtgaaacaggactcgccagaagtt
aaagtggagaaggagaacgtggcgggccagggcgataagggcgcggcgaagccgaaggcg
ccggtgagcagcgccgcgcgcctctcgtccgacctcacccgcgagaccgacgaggccgcc
tttgtgccagactacaacgagagcgacagcgagagcaacgtgtctgcaaaggacgaggag
gctgcagggaaaacgcccaaagaggcgaaggaaaaggctgtggagaagctgaaagaggag
gtggcggccccggctcccgccgagcagccggaggtgggcaggagccagagccagagcagc
cccagcgtcagccgcagccgcagccacagcccctccgagagccagacacggagccacagc
agcagtgccagctcaggggagagccaggacagcaagaaaaagaaaaagaagaaggagaag
aagaagcacaagaaacacaagaaacataagaagcataagaaacacatgggaaatgaaaca
gaattggaaaagagccaaaaacacaaacacaagaagaaaaaatcgaagaagagcaaagat
aaagagaaagacgaccaaaaagtgaaatctgtcacgacataa
DBGET
integrated database retrieval system
