Pseudopodoces humilis (Tibetan ground-tit): 102105364
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Entry
102105364 CDS
T02921
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102105364 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105364 (RAG1)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105364 (RAG1)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102105364 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
DUF5981
Motif
Other DBs
NCBI-GeneID:
102105364
NCBI-ProteinID:
XP_005522455
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MSVASQMDLPEELQHTYTKFSEWKFKLFKLPSFEKTPSDDSQLISKDQVEEAVSSNKEFI
LHKDEAVPRGEKMELTSNRQGLEEDAHAMKTQDNREHQNNLKQLCRICGVSFKTDCYKRT
YPVHGPVDDETLCLLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTQFCHNCWSIIHGK
FSNTLCEVYFPRNSAMEWQPHSPNCDVCLTARRGVKRKSQPPNVQRGKRVKTTGERARLN
RGVKNQAQINNKNLMKDIVNCKDIHLSTKLLSIDYPVDFIKSISCQICDHILADPVETTC
RHLFCRTCVLKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLTIRCPVKECDEEIL
HGKYGQHLSGHKEMKDRELCSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCSQYHK
MYRTVKAVTGRQVFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPL
SIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNISVAHGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKNSELLLEMGGILRTFRFIFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQSFTIDSGGSLG
DSLPLEVLENNDSSEL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcatcacaaatggacctacctgaagaacttcagcatacatacacaaaattt
tctgaatggaaattcaagctctttaaattgccatcatttgaaaaaacaccctctgatgac
agccagctcataagcaaagatcaggtagaagaggctgtttcttcaaacaaagaattcatc
ctgcataaagatgaagcagtgccaagaggagaaaagatggagttaacaagcaataggcag
ggacttgaggaagatgcccatgccatgaaaacacaagacaatagagaacatcagaacaat
ctgaagcaactctgccgcatctgtggagtttcatttaaaactgattgctacaagagaacc
tacccagtgcatgggccagtggatgatgaaactctgtgccttctgagaaagaaagaaaaa
acagcaacctcttggccagatcttattgctaaagttttcaagattgatgtgcgaggggat
gtcgatactattcatcccactcaattctgtcacaactgttggagtattatacatggaaaa
ttcagtaatactctatgtgaagtatattttcctaggaacagcgcaatggagtggcaaccc
cattccccaaactgtgatgtgtgccttactgccagacgaggagtcaagagaaaaagccag
cccccaaatgtacaacgtggtaaacgtgtcaaaaccactggagaacgtgctcggctaaac
agaggtgtaaagaaccaagcacagataaacaacaaaaatttaatgaaagacattgtcaat
tgcaaggatatacatctcagcaccaagctgctttcaattgattacccagtagatttcatt
aaatccatttcttgccagatctgtgatcatattttggcagatccagtggaaacaacgtgc
agacacttgttttgcagaacttgcgtccttaaatgtatcagggttatgggcagctattgc
ccctcctgctggtatccttgctttcctactgatctggtaaccccagtgaaatccttcctg
aacatccttgataacctgactataagatgccctgtaaaggaatgtgatgaagagatcttg
cacggaaaatatggccaacacctctctggtcacaaggagatgaaagacagagagctctgt
agctacatcaataaaggtggtcgaccaaggcagcacctcctgtccttgacgaggagagct
cagaaacatcgtctgagggaactgaaacgtcaagtcaaggcttttgctgagaaagaagag
ggaggtgatataaaggctgtatgcatgactttgttcctgttagctttgagagcaaaaaat
gaacacaaacaagcagatgaactggaggctataatgcaagggaggggatctggacttcat
cccgctgtctgtttggccatccgaatcaacacgtttctcagctgtagtcagtatcataaa
atgtatagaacagtaaaagctgtcaccgggaggcaggtcttccagcctttgcatgctctt
cgcactgctgagaaagccctcctaccaggttatcacccatttgagtggaaacctcccctg
aaaaatgtatccactaacacagaagtgggaattatagatggactatcaggactgccactg
tcaattgatgattacccagtagacacaattgcaaagagattccgatatgatgcagccttg
gtttgtgccttaaaggacatggaggaggagatcttggaaggcatgaaagcaaaaaacctg
gacgactatttgaatggccccttcactgtggtggtaaaagagtcctgtgatggaatggga
gacgtcagtgaaaagcatggaagtgggcctgctgtccccgagaaggctgttcgattttct
ttcacagtcatgaacatttctgtagcacatgggaatgaaagcaagaggatctttgaggaa
gtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctggctgatgaatca
gatcatgaaactctgacagcaattctgagccccctcatagcagaaagagaggctatgaaa
aacagtgagctgctgcttgaaatgggaggcatcctgagaacatttaggttcatcttcagg
ggtacaggatatgatgagaaactcgtgcgggaagtggaaggactggaggcctcaggttcc
acttacatttgtaccctgtgtgatgcaacccgcttggaggcatcccagaatctggtcttc
cactccataaccaggagccatgctgaaaatctggagcgatatgaaatatggaggtccaac
ccatatcacgagtctgttgatgagcttcgtgacagagtgaagggtgtttcagccaaacct
tttattgagactgttccctccatagatgcattgcactgtgacattggcaatgcaacagaa
ttctacaggattttccagatggagattggtgaactttacaagaatcctgatgtgtctaaa
gaggagaggaagagatggcagttgactcttgacaaacacctcaggaagaagatgaacctg
aagcctatgttgaagatgagtggaaattttgctagaaagcttatgtccaaagagactgta
gaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagcccttaaagaactaatg
gacctttatctgaagatgaagccagtgtggcggtcctcatgccctgccaaggagtgccca
gaactgctgtgccagtacagctacaattcacagcgttttgcggaactcttatctacaaag
ttcaagtacaggtatgaaggcaagattacaaattatttccacaaaacacttgctcatgtt
cctgaaatcattgaaagagatgggtccattggggcctgggcaagtgaaggaaatgagtct
ggaaacaaactgtttaggaggttccgaaaaatgaatgccaggcagtccaaagtctatgag
atggaggatgtcttgaagcaccactggctatatacctccaagtacctccagaagttcatg
aatgcccataaaacattaaaaagccagagcttcaccattgattcagggggtagtttaggt
gactccttgccactggaggtcttggaaaacaatgattcatcagaactctga
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