Pseudopodoces humilis (Tibetan ground-tit): 102105375
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Entry
102105375 CDS
T02921
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phi00535
]
102105375 (NYX)
Proteoglycans [BR:
phi00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
102105375 (NYX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRRCT_2
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
102105375
NCBI-ProteinID:
XP_005526662
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MFAIILNVILWVPQVHGVWACVRSCPPSCVCTPERSCSVLCDRAGLGQIPSEFPCEASSI
NLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLH
TRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQELFCFQNNFRRIPGAIRGMENLTHV
YLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIHERAFQGCQRMEYLYLNDNLISELPE
NSFDGLRRLKMLNLGGNFLRNISNTWFRDLGELEFLYLDRNRISYIEEGAFENLTSLVAL
HLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDCRIEWLKEWMENYRLVRDIPCASPSS
VAGTDLTDVLFERSPEGYCLDPVELNITSEGPAPSEEPWSTTESKFNSLISKLLLQMGLP
EEVANATEVYSNTTQPDGQTEGVSSGMGEERTKADSSSLYLPALFTVIVLLCI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatcattctaaatgtgatcctttgggtcccacaggtccatggggtgtgggcc
tgtgtgcgctcctgccctcccagctgtgtgtgcacgccggagaggagctgctccgtgctc
tgtgaccgtgctgggctggggcagatccccagcgagttcccctgcgaagcctcttccatc
aacctggataaaaacagcatcaagttcctgtccgagagggcctttgggacactgccttcc
ctcaagtccctgtctctcaaccacaacaacatctccttcatcactccaggggcgttcaag
gggctgcccagcctgacggagctgaagatggcccacaacgagtacattcgctatctccac
actcggaccttcaccgcgctccggcgcctcgtgaggctggacctggctgactgcaacctc
ttcaacatcccagacaggatcttcatcgagctgcctgctctgcaggagctgttctgcttc
cagaacaacttccgaaggatcccaggtgccatcaggggcatggagaacttgacccatgtg
tacctggagagaaataggatcgaagcggtggcctataactccctgcagggcctgactaag
ctgaaatacctgaatctgcaggacaacaagataaatgtcatccatgagcgagcttttcag
ggctgtcagaggatggagtacctgtacctgaatgacaacttgatcagtgagcttccagaa
aactcctttgatggcctgaggcgcctgaagatgctcaacctgggggggaattttctcagg
aacatttccaacacctggttccgggacttgggggagctggagttcctctacctggaccgc
aacaggatcagctacatcgaggaaggggcttttgagaacctcaccagcctggtggcgctg
cacttgaacagcaacaacttgaccacgctgcccttctcggtgttcgagcccgtgtacttc
ctggggcgcctgtacctcttccgcaacccctgggagtgcgactgccgcatcgagtggctc
aaggagtggatggagaactacaggctcgtcagggatattccgtgtgcctccccctcctcc
gtggctggcactgatctgacggatgtgctcttcgagaggtctcccgagggttactgcctc
gacccggtggagctgaacatcacgtccgaggggccggccccgagcgaggagccttggtcc
accacagagagcaagttcaacagccttatctccaaactcttgctccagatgggccttccc
gaagaggtggcaaatgccactgaggtgtacagtaacaccacgcagccggacggacagact
gaaggggtctcttctggcatgggggaagaaagaaccaaggctgactcctcctccttgtac
ctcccagcactttttacagtgattgttctgctgtgcatatag
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