Pseudopodoces humilis (Tibetan ground-tit): 102105700
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Entry
102105700 CDS
T02921
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102105700 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phi01009
]
102105700 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102105700 (PCDH1)
Protein phosphatases and associated proteins [BR:
phi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102105700 (PCDH1)
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102105700 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Cadherin_4
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
102105700
NCBI-ProteinID:
XP_005532718
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
METPRDQRAGARHAARSRHHPTPLQRRMNPLASCLGLWLLCQLPALASGTRAIYKVQEEQ
PPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRENLRECQHLLP
GEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFS
IPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDL
TIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSD
QGSNAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKS
ARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENA
VVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSS
TNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTD
PSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDN
DPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTIL
SSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILP
HTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLH
RLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSK
QRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKS
KSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHY
RSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKY
TNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHY
ERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNAL
KLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEI
PLTQTSDFQPATTPSAQTTKREIYL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccgcgggaccagcgcgcaggggctcggcacgcagcgcggagccggcaccat
ccaactcccctgcagcgcaggatgaacccgctggcgtcctgcctcggcctgtggctcctc
tgccagctcccagccctggcctcggggacacgtgccatctacaaagtgcaggaggaacaa
ccccccaacagcctcatagggagcctggcctctgactacggcttaccggacatggggcac
ctctacaagctggaagtgggggccccgtacctccgtgtggatggcaagacaggggacatc
tacaccacagagacctccatcgaccgggagaacctgcgggagtgccagcacctcctccct
ggagagccctgcttcctggagttcgaggtgtccatcactaacctgaacgccaacagcagc
ccgcgcctgctcgaggggcagatcgaggtgctcgatatcaatgacaacacccccaacttc
gcctcgcccgtcctcaccctctccatccccgaaaacaccaacatcgggacgctcttctcc
atccccctggccatggaccgggactcaggccccaatggcgttgcctcctacgagctgatg
gctggtccggaggcgcaggagctctttgggctgcaggtggccgaggaccaggatgagaag
cagcctcagctgatcgtcatggggaacctggaccgggagcagtgggactcctacgatctg
accatcaaggtgcaggatgggggaaaccccccgcgggcaagcagtgccctgctccgcatc
accatcctggacatgaacgacaacgcgcccaagttcgagaaggccctgtacgaggcagag
ctctctgaaaacagcccagtggggcactctgtcctccaggtgaaagccaacgattcggac
cagggttccaatgccgagatcgactactccttccaccaggcctcggacatggtgcggcgg
ctgctgcgcctggaccgcgccacagggctcatcaccgtgcagggccccatcgaccgtgag
gacattggcaccctcaagttctctgtcatggccaaggacaagggcgccaaccccaagagc
gcccgcacgcaggtggtggtcaccatcaaggacatgaatgacaacgcaccctccatagag
attcggggcataggattggtcacccaccaggatggcatggccaacatctcggaggacgtg
ccagtagagacagcagtggctctggtgcaggtgtccgaccgagatgagggtgaaaatgca
gtggtgacctgcgtggtggccggtgacgtcccattccagctgcgccaggccagtgagaca
gggagtgacagcaagaagaaatacttcctgcagaccaccacgccgctggactatgagtcg
gtgaaggagtacacgattgagattgtggccgtggactcagggaacccgcccctctccagc
accaactccttgaaggtgcaggtgatggacgtgaatgataatgcccctgtcttcagccag
agcttcactgaggtggccttccctgagaacaacgagcccgatgagctggtcatggaggtg
agcgccactgatgctgacagtggctccaacgctaagctggtttattccctggtgacagac
ccctcctccaagggctctttcaccattgaccctgactccggggagatccgggtgaaggcg
gtgctggaccgagagcagcgagaacgctacgagttcttggtggtggcagaagataagggt
agccccagcaagcagggcacagcgtccgtggccatcaacgtcatggacaggaatgacaac
gacccgaagttcatgctgagcggctacaacttctcagtgatggagaacatgccgcccctc
agccccgtgggcatggtgacggtcatcgatgctgacaaaggagaaaatgcccggatccag
ctgtcagtggagcaagacaatggggattttgtcatccaaaatggcactggcaccatcctc
tccagcatctctttcgaccgggagcagcagagcacctacaccttccgactcaaggcggtg
gatggtggggatccacccaggtctgcctatgtgggggtgaccatcaacgtcttggatgag
aatgacaatgcccccttcatcacttccccctccaatgccacctacaagcacatcctgccc
cacaccagtcccggccagcaggtgagcaaggtcaaggcagaggacatcgactcaggcatc
aatgccgagctgatctacagcatcacaggaggaaacccctttgagctcttccagatctcc
ccgcagagcggagacatcaccctggagaaggagatcctgcgcaagcaccatggcctgcac
cgcctggttgtgcgtgtcaacgacaagggcaagccctcgcggcacggcacggctctggtg
cacttctacgtcaacgagacgctggccaaccgcacgctgctggacacgctggtggggcac
agcctggacaccccgctggacatcgacatcgccggtgaccctgagtacgagcgcagcaaa
cagcggagcaacatcctcttcggagtcatcgccggcatcgtggccgtcaccctggtcatc
gtgctggtggtcctggtgcgctactgccggcagcgtgaggccaagagtggctaccaggca
ggcaagaaggagaccaaggacctgtatgcacccaagcaggccagcaagagcgggaagagc
aagagcaaagtgaagaagagcaagtctcccaaaccgcccaagcccacagaggatgaggag
gagacagggctgcagaaatcgctcaagttcaacctcatgaatgactccgtcagtgacagc
ccccggatccacctgcccctgaactaccctccgggcagcccagacctgggccgccactac
cgctccaactcaccgctgccctccatccagctgcagcctcagtcaccctccgcctccaag
aagcaccaagtggtgcaggacctgccggccaccaacacctttgttggcaccggggacaac
aactcgacgggctccgagcaatactcggactacagctaccgcaccaatccccagaaatac
accaacaagcagttacctcatcgccgagtgacgttctctgcagccagccaggctcaggac
ctgcaggacccctcccagcacagctactacgacagcgggctggaggaatctgagaccccc
agcagcaaatcttcgtcggggccccgcatcgggcccctggccctgcccgaggaccactac
gagcgcaccacgcctgatggcagcatcggggagatggagcaccctgagaacgatctccgg
cctctgcccgacgtagccatgactgggacctgcacccgggagtgcacagagttcggccac
tccgacacctgctggatgcccggacagtcctcccccagccgcaggcccaagaacgccctc
aaactctccacttttgtgccttaccaagacagagggagtcaagagcaagtcgggaacggc
agccccagactgtcggaagagcgcagcaccaaaatggccaacctccgcctgctccccacg
tacagtgccttctccaatagtagccatgagccctgcaaggactctcccatggaggaaatt
cctctcacccagacctcggacttccagccagccaccaccccgtcggcccagaccaccaag
agggagatctacctgtga
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integrated database retrieval system
